Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 NPSR1-208ENST00000465305 814 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 LINC02010-201ENST00000470860 516 ntTSL 4 BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 RN7SL705P-201ENST00000481678 294 ntBASIC7.68□□□□□ -1.18
PHC3Q8NDX5 PFN2-213ENST00000494827 793 ntTSL 4 BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 LINC02200-203ENST00000513687 541 ntTSL 3 BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 Y_RNA.655-201ENST00000515919 96 ntBASIC7.68□□□□□ -1.18
PHC3Q8NDX5 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 AC079064.1-201ENST00000528365 362 ntBASIC7.68□□□□□ -1.18
PHC3Q8NDX5 AP000435.1-201ENST00000528539 496 ntBASIC7.68□□□□□ -1.18
PHC3Q8NDX5 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 OVCH1-AS1-201ENST00000549411 743 ntTSL 3 BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 AC021483.2-201ENST00000567415 758 ntBASIC7.68□□□□□ -1.18
PHC3Q8NDX5 RBM22P13-201ENST00000569805 1244 ntBASIC7.68□□□□□ -1.18
PHC3Q8NDX5 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 AC005244.1-201ENST00000582566 339 ntBASIC7.68□□□□□ -1.18
PHC3Q8NDX5 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 AC074135.1-201ENST00000594318 581 ntTSL 4 BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 AC008392.1-201ENST00000600941 437 ntTSL 2 BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 AC010719.1-201ENST00000602992 747 ntBASIC7.68□□□□□ -1.18
PHC3Q8NDX5 AC002069.2-201ENST00000603580 883 ntBASIC7.68□□□□□ -1.18
PHC3Q8NDX5 AC080013.3-201ENST00000606839 578 ntBASIC7.68□□□□□ -1.18
PHC3Q8NDX5 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 AC005021.1-201ENST00000608730 355 ntBASIC7.68□□□□□ -1.18
PHC3Q8NDX5 MIR6761-201ENST00000617899 72 ntBASIC7.68□□□□□ -1.18
PHC3Q8NDX5 PFN1P2-202ENST00000621347 397 ntBASIC7.68□□□□□ -1.18
PHC3Q8NDX5 AC079456.1-201ENST00000624010 480 ntBASIC7.68□□□□□ -1.18
PHC3Q8NDX5 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 AC016251.2-201ENST00000623393 3089 ntBASIC7.68□□□□□ -1.18
PHC3Q8NDX5 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 AC119674.1-202ENST00000641333 1860 ntBASIC7.68□□□□□ -1.18
PHC3Q8NDX5 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 AL359715.4-201ENST00000606629 1436 ntBASIC7.68□□□□□ -1.18
PHC3Q8NDX5 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PHC3Q8NDX5 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
PHC3Q8NDX5 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.67□□□□□ -1.18
PHC3Q8NDX5 TRAF6P1-201ENST00000429404 1558 ntBASIC7.67□□□□□ -1.18
PHC3Q8NDX5 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.67□□□□□ -1.18
PHC3Q8NDX5 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC7.67□□□□□ -1.18
PHC3Q8NDX5 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC7.67□□□□□ -1.18
PHC3Q8NDX5 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
PHC3Q8NDX5 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.67□□□□□ -1.18
PHC3Q8NDX5 RGS7-202ENST00000366563 2206 ntTSL 5 BASIC7.67□□□□□ -1.18
PHC3Q8NDX5 THAP12P1-201ENST00000398672 2203 ntBASIC7.67□□□□□ -1.18
PHC3Q8NDX5 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC7.67□□□□□ -1.18
PHC3Q8NDX5 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
PHC3Q8NDX5 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
PHC3Q8NDX5 OFD1P17-201ENST00000437639 3018 ntBASIC7.67□□□□□ -1.18
PHC3Q8NDX5 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
PHC3Q8NDX5 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
PHC3Q8NDX5 SSR1-210ENST00000489567 1893 ntTSL 3 BASIC7.67□□□□□ -1.18
PHC3Q8NDX5 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
PHC3Q8NDX5 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
PHC3Q8NDX5 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
PHC3Q8NDX5 AL450313.1-201ENST00000366376 452 ntTSL 3 BASIC7.67□□□□□ -1.18
PHC3Q8NDX5 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC7.67□□□□□ -1.18
PHC3Q8NDX5 SNORA10-201ENST00000384084 133 ntBASIC7.67□□□□□ -1.18
PHC3Q8NDX5 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
PHC3Q8NDX5 RPL7P27-201ENST00000403775 720 ntBASIC7.67□□□□□ -1.18
PHC3Q8NDX5 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC7.67□□□□□ -1.18
PHC3Q8NDX5 AL353052.1-201ENST00000428673 818 ntTSL 3 BASIC7.67□□□□□ -1.18
PHC3Q8NDX5 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC7.67□□□□□ -1.18
PHC3Q8NDX5 GTF2IP3-201ENST00000433887 494 ntBASIC7.67□□□□□ -1.18
PHC3Q8NDX5 AC073143.1-201ENST00000436316 395 ntBASIC7.67□□□□□ -1.18
PHC3Q8NDX5 AL359502.1-201ENST00000437334 692 ntTSL 3 BASIC7.67□□□□□ -1.18
PHC3Q8NDX5 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
PHC3Q8NDX5 AL359265.1-201ENST00000440296 795 ntBASIC7.67□□□□□ -1.18
PHC3Q8NDX5 AL592182.2-201ENST00000442477 858 ntTSL 2 BASIC7.67□□□□□ -1.18
PHC3Q8NDX5 CD59-206ENST00000445143 825 ntAPPRIS P2 TSL 3 BASIC7.67□□□□□ -1.18
PHC3Q8NDX5 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC7.67□□□□□ -1.18
PHC3Q8NDX5 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC7.67□□□□□ -1.18
PHC3Q8NDX5 MED28P8-201ENST00000454831 521 ntBASIC7.67□□□□□ -1.18
PHC3Q8NDX5 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC7.67□□□□□ -1.18
PHC3Q8NDX5 MTND2P28-201ENST00000457540 1044 ntBASIC7.67□□□□□ -1.18
PHC3Q8NDX5 PPIAP28-201ENST00000458378 485 ntBASIC7.67□□□□□ -1.18
PHC3Q8NDX5 AC092691.2-201ENST00000461787 803 ntBASIC7.67□□□□□ -1.18
PHC3Q8NDX5 ATP1B3-202ENST00000462082 837 ntTSL 3 BASIC7.67□□□□□ -1.18
PHC3Q8NDX5 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms