Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RPL35P8-201ENST00000433284 337 ntBASIC6.64□□□□□ -1.35
NR1H2P55055 AL451136.1-201ENST00000435399 325 ntBASIC6.64□□□□□ -1.35
NR1H2P55055 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC6.64□□□□□ -1.35
NR1H2P55055 AC012493.1-201ENST00000453252 760 ntBASIC6.64□□□□□ -1.35
NR1H2P55055 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC6.64□□□□□ -1.35
NR1H2P55055 AC013429.1-201ENST00000456604 422 ntBASIC6.64□□□□□ -1.35
NR1H2P55055 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.64□□□□□ -1.35
NR1H2P55055 RN7SL233P-201ENST00000469988 277 ntBASIC6.64□□□□□ -1.35
NR1H2P55055 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC6.64□□□□□ -1.35
NR1H2P55055 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC6.64□□□□□ -1.35
NR1H2P55055 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
NR1H2P55055 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
NR1H2P55055 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC6.64□□□□□ -1.35
NR1H2P55055 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.64□□□□□ -1.35
NR1H2P55055 AP000662.1-201ENST00000530952 487 ntBASIC6.64□□□□□ -1.35
NR1H2P55055 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
NR1H2P55055 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.64□□□□□ -1.35
NR1H2P55055 ATP5J2P4-201ENST00000538774 267 ntBASIC6.64□□□□□ -1.35
NR1H2P55055 AC126177.6-201ENST00000550420 1009 ntBASIC6.64□□□□□ -1.35
NR1H2P55055 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC6.64□□□□□ -1.35
NR1H2P55055 AC067805.1-201ENST00000559344 470 ntBASIC6.64□□□□□ -1.35
NR1H2P55055 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NR1H2P55055 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC6.64□□□□□ -1.35
NR1H2P55055 5S_rRNA.20-201ENST00000612104 118 ntBASIC6.64□□□□□ -1.35
NR1H2P55055 MIR6883-201ENST00000614952 78 ntBASIC6.64□□□□□ -1.35
NR1H2P55055 pRNA.9-201ENST00000618609 89 ntBASIC6.64□□□□□ -1.35
NR1H2P55055 CFTRP2-201ENST00000634304 199 ntBASIC6.64□□□□□ -1.35
NR1H2P55055 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NR1H2P55055 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC6.64□□□□□ -1.35
NR1H2P55055 WNK1-220ENST00000574564 1401 ntBASIC6.64□□□□□ -1.35
NR1H2P55055 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NR1H2P55055 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NR1H2P55055 AC012078.1-201ENST00000405035 1646 ntBASIC6.64□□□□□ -1.35
NR1H2P55055 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NR1H2P55055 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.64□□□□□ -1.35
NR1H2P55055 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
NR1H2P55055 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.64□□□□□ -1.35
NR1H2P55055 AL136531.3-201ENST00000624378 3658 ntBASIC6.64□□□□□ -1.35
NR1H2P55055 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NR1H2P55055 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NR1H2P55055 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NR1H2P55055 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.63□□□□□ -1.35
NR1H2P55055 TTC41P-205ENST00000551270 3963 ntBASIC6.63□□□□□ -1.35
NR1H2P55055 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.63□□□□□ -1.35
NR1H2P55055 LCOR-201ENST00000286067 4542 ntBASIC6.63□□□□□ -1.35
NR1H2P55055 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
NR1H2P55055 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
NR1H2P55055 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
NR1H2P55055 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
NR1H2P55055 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NR1H2P55055 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
NR1H2P55055 SNORA70.9-201ENST00000384370 135 ntBASIC6.63□□□□□ -1.35
NR1H2P55055 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.63□□□□□ -1.35
NR1H2P55055 RPL7P58-201ENST00000402913 758 ntBASIC6.63□□□□□ -1.35
NR1H2P55055 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.63□□□□□ -1.35
NR1H2P55055 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC6.63□□□□□ -1.35
NR1H2P55055 MEAF6P1-201ENST00000416092 327 ntBASIC6.63□□□□□ -1.35
NR1H2P55055 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NR1H2P55055 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.63□□□□□ -1.35
NR1H2P55055 FDPSP6-201ENST00000425091 512 ntBASIC6.63□□□□□ -1.35
NR1H2P55055 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
NR1H2P55055 HMGN1P6-201ENST00000438508 291 ntBASIC6.63□□□□□ -1.35
NR1H2P55055 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NR1H2P55055 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC6.63□□□□□ -1.35
NR1H2P55055 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC6.63□□□□□ -1.35
NR1H2P55055 GTF2F2P2-201ENST00000445825 721 ntBASIC6.63□□□□□ -1.35
NR1H2P55055 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NR1H2P55055 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.63□□□□□ -1.35
NR1H2P55055 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.63□□□□□ -1.35
NR1H2P55055 RPL23P10-201ENST00000468780 412 ntBASIC6.63□□□□□ -1.35
NR1H2P55055 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC6.63□□□□□ -1.35
NR1H2P55055 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC6.63□□□□□ -1.35
NR1H2P55055 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC6.63□□□□□ -1.35
NR1H2P55055 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.63□□□□□ -1.35
NR1H2P55055 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NR1H2P55055 RN7SL516P-201ENST00000496127 297 ntBASIC6.63□□□□□ -1.35
NR1H2P55055 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC6.63□□□□□ -1.35
NR1H2P55055 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.63□□□□□ -1.35
NR1H2P55055 LINC01085-203ENST00000511195 326 ntBASIC6.63□□□□□ -1.35
NR1H2P55055 TRIM60P14-201ENST00000513444 1419 ntBASIC6.63□□□□□ -1.35
NR1H2P55055 RN7SKP248-201ENST00000516278 305 ntBASIC6.63□□□□□ -1.35
NR1H2P55055 RPL10P18-201ENST00000519384 309 ntBASIC6.63□□□□□ -1.35
NR1H2P55055 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC6.63□□□□□ -1.35
NR1H2P55055 AC013488.1-201ENST00000526618 1838 ntBASIC6.63□□□□□ -1.35
NR1H2P55055 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC6.63□□□□□ -1.35
NR1H2P55055 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC6.63□□□□□ -1.35
NR1H2P55055 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC6.63□□□□□ -1.35
NR1H2P55055 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC6.63□□□□□ -1.35
NR1H2P55055 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
NR1H2P55055 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NR1H2P55055 AP006587.6-201ENST00000582128 1091 ntBASIC6.63□□□□□ -1.35
NR1H2P55055 AC137695.2-201ENST00000603123 754 ntBASIC6.63□□□□□ -1.35
NR1H2P55055 AC012467.1-201ENST00000607740 256 ntBASIC6.63□□□□□ -1.35
NR1H2P55055 AL118556.2-201ENST00000614375 824 ntBASIC6.63□□□□□ -1.35
NR1H2P55055 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.63□□□□□ -1.35
NR1H2P55055 AC137056.2-201ENST00000624055 1958 ntBASIC6.63□□□□□ -1.35
NR1H2P55055 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC6.63□□□□□ -1.35
NR1H2P55055 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.63□□□□□ -1.35
NR1H2P55055 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.63□□□□□ -1.35
NR1H2P55055 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms