Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 RPL9P15-201ENST00000491096 532 ntBASIC7.12□□□□□ -1.27
LHX1P48742 AC015524.1-201ENST00000491585 472 ntBASIC7.12□□□□□ -1.27
LHX1P48742 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC7.12□□□□□ -1.27
LHX1P48742 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LHX1P48742 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.12□□□□□ -1.27
LHX1P48742 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LHX1P48742 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.12□□□□□ -1.27
LHX1P48742 MIR3157-201ENST00000578688 85 ntBASIC7.12□□□□□ -1.27
LHX1P48742 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.12□□□□□ -1.27
LHX1P48742 MIR4732-201ENST00000581873 76 ntBASIC7.12□□□□□ -1.27
LHX1P48742 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.12□□□□□ -1.27
LHX1P48742 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.12□□□□□ -1.27
LHX1P48742 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC7.12□□□□□ -1.27
LHX1P48742 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC7.12□□□□□ -1.27
LHX1P48742 AC048341.3-201ENST00000619323 491 ntBASIC7.12□□□□□ -1.27
LHX1P48742 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
LHX1P48742 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC7.12□□□□□ -1.27
LHX1P48742 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC7.12□□□□□ -1.27
LHX1P48742 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.12□□□□□ -1.27
LHX1P48742 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC7.12□□□□□ -1.27
LHX1P48742 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.12□□□□□ -1.27
LHX1P48742 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LHX1P48742 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LHX1P48742 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.12□□□□□ -1.27
LHX1P48742 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
LHX1P48742 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LHX1P48742 AC013268.3-201ENST00000262716 2324 ntBASIC7.12□□□□□ -1.27
LHX1P48742 AL023806.3-201ENST00000638502 2704 ntBASIC7.12□□□□□ -1.27
LHX1P48742 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
LHX1P48742 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
LHX1P48742 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
LHX1P48742 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.11□□□□□ -1.27
LHX1P48742 AC007993.1-201ENST00000621298 2430 ntBASIC7.11□□□□□ -1.27
LHX1P48742 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC7.11□□□□□ -1.27
LHX1P48742 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LHX1P48742 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.11□□□□□ -1.27
LHX1P48742 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.11□□□□□ -1.27
LHX1P48742 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC7.11□□□□□ -1.27
LHX1P48742 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC7.11□□□□□ -1.27
LHX1P48742 AC009237.3-203ENST00000442128 3551 ntBASIC7.11□□□□□ -1.27
LHX1P48742 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
LHX1P48742 PSMC1P6-201ENST00000477233 1319 ntBASIC7.11□□□□□ -1.27
LHX1P48742 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LHX1P48742 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.11□□□□□ -1.27
LHX1P48742 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
LHX1P48742 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LHX1P48742 PPIAP24-201ENST00000328558 471 ntBASIC7.11□□□□□ -1.27
LHX1P48742 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
LHX1P48742 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LHX1P48742 MIR191-201ENST00000384873 92 ntBASIC7.11□□□□□ -1.27
LHX1P48742 AC096537.2-201ENST00000413707 714 ntBASIC7.11□□□□□ -1.27
LHX1P48742 AL929472.1-201ENST00000417484 429 ntBASIC7.11□□□□□ -1.27
LHX1P48742 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC7.11□□□□□ -1.27
LHX1P48742 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.11□□□□□ -1.27
LHX1P48742 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC7.11□□□□□ -1.27
LHX1P48742 GAPDHP37-201ENST00000442317 968 ntBASIC7.11□□□□□ -1.27
LHX1P48742 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.11□□□□□ -1.27
LHX1P48742 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC7.11□□□□□ -1.27
LHX1P48742 AC004890.1-201ENST00000461005 181 ntBASIC7.11□□□□□ -1.27
LHX1P48742 RPL5P11-201ENST00000498068 893 ntBASIC7.11□□□□□ -1.27
LHX1P48742 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LHX1P48742 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
LHX1P48742 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC7.11□□□□□ -1.27
LHX1P48742 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
LHX1P48742 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC7.11□□□□□ -1.27
LHX1P48742 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC7.11□□□□□ -1.27
LHX1P48742 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC7.11□□□□□ -1.27
LHX1P48742 MIR212-201ENST00000586026 110 ntBASIC7.11□□□□□ -1.27
LHX1P48742 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC7.11□□□□□ -1.27
LHX1P48742 AC245052.7-201ENST00000601161 359 ntBASIC7.11□□□□□ -1.27
LHX1P48742 AC114477.1-201ENST00000605097 605 ntBASIC7.11□□□□□ -1.27
LHX1P48742 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC7.11□□□□□ -1.27
LHX1P48742 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC7.11□□□□□ -1.27
LHX1P48742 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC7.11□□□□□ -1.27
LHX1P48742 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LHX1P48742 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
LHX1P48742 ASNSP6-201ENST00000592770 1618 ntBASIC7.11□□□□□ -1.27
LHX1P48742 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.11□□□□□ -1.27
LHX1P48742 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.11□□□□□ -1.27
LHX1P48742 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.11□□□□□ -1.27
LHX1P48742 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LHX1P48742 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LHX1P48742 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LHX1P48742 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC7.11□□□□□ -1.27
LHX1P48742 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
LHX1P48742 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LHX1P48742 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.1□□□□□ -1.27
LHX1P48742 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LHX1P48742 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.1□□□□□ -1.27
LHX1P48742 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LHX1P48742 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
LHX1P48742 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.1□□□□□ -1.27
LHX1P48742 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.1□□□□□ -1.27
LHX1P48742 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LHX1P48742 LRRC37A15P-201ENST00000514785 1355 ntBASIC7.1□□□□□ -1.27
LHX1P48742 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.1□□□□□ -1.27
LHX1P48742 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
LHX1P48742 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.1□□□□□ -1.27
LHX1P48742 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.1□□□□□ -1.27
LHX1P48742 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms