Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 EML3-212ENST00000494176 2901 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01558Q9Y6Z2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 GATB-213ENST00000515812 1893 ntTSL 5 BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01558Q9Y6Z2 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 EBPL-202ENST00000378268 680 ntTSL 3 BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01558Q9Y6Z2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms