Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHGA6Q9Y5G7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PCDHGA6Q9Y5G7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
PCDHGA6Q9Y5G7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA6Q9Y5G7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA6Q9Y5G7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PCDHGA6Q9Y5G7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA6Q9Y5G7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA6Q9Y5G7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PCDHGA6Q9Y5G7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGA6Q9Y5G7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PCDHGA6Q9Y5G7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA6Q9Y5G7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA6Q9Y5G7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDHGA6Q9Y5G7 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA6Q9Y5G7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHGA6Q9Y5G7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA6Q9Y5G7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.15■□□□□ 0.66
PCDHGA6Q9Y5G7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.15■□□□□ 0.66
PCDHGA6Q9Y5G7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA6Q9Y5G7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHGA6Q9Y5G7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA6Q9Y5G7 AC005829.2-201ENST00000571422 1056 ntBASIC19.15■□□□□ 0.66
PCDHGA6Q9Y5G7 Z99916.2-201ENST00000604037 246 ntBASIC19.15■□□□□ 0.66
PCDHGA6Q9Y5G7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PCDHGA6Q9Y5G7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA6Q9Y5G7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGA6Q9Y5G7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PCDHGA6Q9Y5G7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PCDHGA6Q9Y5G7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PCDHGA6Q9Y5G7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCDHGA6Q9Y5G7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PCDHGA6Q9Y5G7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.14■□□□□ 0.66
PCDHGA6Q9Y5G7 AC027702.1-201ENST00000563810 1770 ntBASIC19.14■□□□□ 0.66
PCDHGA6Q9Y5G7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA6Q9Y5G7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA6Q9Y5G7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA6Q9Y5G7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA6Q9Y5G7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA6Q9Y5G7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA6Q9Y5G7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.14■□□□□ 0.65
PCDHGA6Q9Y5G7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHGA6Q9Y5G7 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.14■□□□□ 0.65
PCDHGA6Q9Y5G7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA6Q9Y5G7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHGA6Q9Y5G7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.14■□□□□ 0.65
PCDHGA6Q9Y5G7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.14■□□□□ 0.65
PCDHGA6Q9Y5G7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA6Q9Y5G7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGA6Q9Y5G7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA6Q9Y5G7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDHGA6Q9Y5G7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA6Q9Y5G7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDHGA6Q9Y5G7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
PCDHGA6Q9Y5G7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PCDHGA6Q9Y5G7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA6Q9Y5G7 AC133681.1-201ENST00000465482 601 ntBASIC19.13■□□□□ 0.65
PCDHGA6Q9Y5G7 MTDHP1-201ENST00000605323 784 ntBASIC19.13■□□□□ 0.65
PCDHGA6Q9Y5G7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
PCDHGA6Q9Y5G7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PCDHGA6Q9Y5G7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDHGA6Q9Y5G7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA6Q9Y5G7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.13■□□□□ 0.65
PCDHGA6Q9Y5G7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PCDHGA6Q9Y5G7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDHGA6Q9Y5G7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
PCDHGA6Q9Y5G7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
PCDHGA6Q9Y5G7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA6Q9Y5G7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA6Q9Y5G7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDHGA6Q9Y5G7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
PCDHGA6Q9Y5G7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA6Q9Y5G7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHGA6Q9Y5G7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA6Q9Y5G7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA6Q9Y5G7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA6Q9Y5G7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PCDHGA6Q9Y5G7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA6Q9Y5G7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA6Q9Y5G7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHGA6Q9Y5G7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA6Q9Y5G7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA6Q9Y5G7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.12■□□□□ 0.65
PCDHGA6Q9Y5G7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHGA6Q9Y5G7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHGA6Q9Y5G7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.12■□□□□ 0.65
PCDHGA6Q9Y5G7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA6Q9Y5G7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.12■□□□□ 0.65
PCDHGA6Q9Y5G7 AC120498.8-201ENST00000614275 531 ntBASIC19.12■□□□□ 0.65
PCDHGA6Q9Y5G7 AL356652.1-201ENST00000615962 565 ntBASIC19.12■□□□□ 0.65
PCDHGA6Q9Y5G7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHGA6Q9Y5G7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
PCDHGA6Q9Y5G7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
PCDHGA6Q9Y5G7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PCDHGA6Q9Y5G7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA6Q9Y5G7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHGA6Q9Y5G7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA6Q9Y5G7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA6Q9Y5G7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA6Q9Y5G7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms