Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGB1Q9Y5G3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGB1Q9Y5G3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGB1Q9Y5G3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGB1Q9Y5G3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
PCDHGB1Q9Y5G3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGB1Q9Y5G3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHGB1Q9Y5G3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGB1Q9Y5G3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHGB1Q9Y5G3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PCDHGB1Q9Y5G3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGB1Q9Y5G3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PCDHGB1Q9Y5G3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGB1Q9Y5G3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGB1Q9Y5G3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGB1Q9Y5G3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGB1Q9Y5G3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGB1Q9Y5G3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PCDHGB1Q9Y5G3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDHGB1Q9Y5G3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHGB1Q9Y5G3 AC120498.10-201ENST00000621827 505 ntBASIC18.17■□□□□ 0.5
PCDHGB1Q9Y5G3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHGB1Q9Y5G3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGB1Q9Y5G3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGB1Q9Y5G3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGB1Q9Y5G3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGB1Q9Y5G3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGB1Q9Y5G3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
PCDHGB1Q9Y5G3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PCDHGB1Q9Y5G3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PCDHGB1Q9Y5G3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHGB1Q9Y5G3 RASA4CP-201ENST00000424092 1398 ntBASIC18.17■□□□□ 0.5
PCDHGB1Q9Y5G3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHGB1Q9Y5G3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGB1Q9Y5G3 KRT16P2-201ENST00000414673 1423 ntBASIC18.16■□□□□ 0.5
PCDHGB1Q9Y5G3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PCDHGB1Q9Y5G3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGB1Q9Y5G3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGB1Q9Y5G3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGB1Q9Y5G3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGB1Q9Y5G3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.16■□□□□ 0.5
PCDHGB1Q9Y5G3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.16■□□□□ 0.5
PCDHGB1Q9Y5G3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGB1Q9Y5G3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGB1Q9Y5G3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGB1Q9Y5G3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGB1Q9Y5G3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PCDHGB1Q9Y5G3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGB1Q9Y5G3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.16■□□□□ 0.5
PCDHGB1Q9Y5G3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB1Q9Y5G3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PCDHGB1Q9Y5G3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB1Q9Y5G3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PCDHGB1Q9Y5G3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB1Q9Y5G3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB1Q9Y5G3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHGB1Q9Y5G3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.15■□□□□ 0.5
PCDHGB1Q9Y5G3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHGB1Q9Y5G3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB1Q9Y5G3 RARRES2P11-201ENST00000635158 484 ntBASIC18.15■□□□□ 0.5
PCDHGB1Q9Y5G3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB1Q9Y5G3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB1Q9Y5G3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHGB1Q9Y5G3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PCDHGB1Q9Y5G3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB1Q9Y5G3 AC007613.1-201ENST00000572811 2597 ntBASIC18.15■□□□□ 0.5
PCDHGB1Q9Y5G3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB1Q9Y5G3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHGB1Q9Y5G3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHGB1Q9Y5G3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHGB1Q9Y5G3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.14■□□□□ 0.5
PCDHGB1Q9Y5G3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.5
PCDHGB1Q9Y5G3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHGB1Q9Y5G3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHGB1Q9Y5G3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.5
PCDHGB1Q9Y5G3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHGB1Q9Y5G3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHGB1Q9Y5G3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGB1Q9Y5G3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHGB1Q9Y5G3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGB1Q9Y5G3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
PCDHGB1Q9Y5G3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGB1Q9Y5G3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PCDHGB1Q9Y5G3 IRS3P-201ENST00000223076 1006 ntBASIC18.14■□□□□ 0.49
PCDHGB1Q9Y5G3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGB1Q9Y5G3 AC090192.1-201ENST00000517740 490 ntBASIC18.14■□□□□ 0.49
PCDHGB1Q9Y5G3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGB1Q9Y5G3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
PCDHGB1Q9Y5G3 AC138932.1-201ENST00000534164 6830 ntBASIC18.14■□□□□ 0.49
PCDHGB1Q9Y5G3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGB1Q9Y5G3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGB1Q9Y5G3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PCDHGB1Q9Y5G3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PCDHGB1Q9Y5G3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHGB1Q9Y5G3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PCDHGB1Q9Y5G3 AC116050.2-201ENST00000612102 1779 ntBASIC18.14■□□□□ 0.49
PCDHGB1Q9Y5G3 AL032819.2-201ENST00000624543 2162 ntBASIC18.14■□□□□ 0.49
PCDHGB1Q9Y5G3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PCDHGB1Q9Y5G3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGB1Q9Y5G3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms