Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB6Q9Y5F9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
PCDHGB6Q9Y5F9 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB6Q9Y5F9 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB6Q9Y5F9 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB6Q9Y5F9 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB6Q9Y5F9 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB6Q9Y5F9 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB6Q9Y5F9 AC008403.3-201ENST00000598924 454 ntBASIC18.75■□□□□ 0.59
PCDHGB6Q9Y5F9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB6Q9Y5F9 AP005212.1-201ENST00000581547 1997 ntBASIC18.75■□□□□ 0.59
PCDHGB6Q9Y5F9 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB6Q9Y5F9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB6Q9Y5F9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB6Q9Y5F9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB6Q9Y5F9 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PCDHGB6Q9Y5F9 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB6Q9Y5F9 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PCDHGB6Q9Y5F9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PCDHGB6Q9Y5F9 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB6Q9Y5F9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB6Q9Y5F9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB6Q9Y5F9 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB6Q9Y5F9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB6Q9Y5F9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB6Q9Y5F9 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHGB6Q9Y5F9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PCDHGB6Q9Y5F9 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB6Q9Y5F9 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDHGB6Q9Y5F9 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB6Q9Y5F9 UNC93B4-201ENST00000505679 747 ntBASIC18.74■□□□□ 0.59
PCDHGB6Q9Y5F9 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB6Q9Y5F9 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHGB6Q9Y5F9 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDHGB6Q9Y5F9 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDHGB6Q9Y5F9 AC073648.6-201ENST00000641589 218 ntBASIC18.74■□□□□ 0.59
PCDHGB6Q9Y5F9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB6Q9Y5F9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
PCDHGB6Q9Y5F9 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGB6Q9Y5F9 AC087633.2-202ENST00000565166 1439 ntBASIC18.74■□□□□ 0.59
PCDHGB6Q9Y5F9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB6Q9Y5F9 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGB6Q9Y5F9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHGB6Q9Y5F9 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB6Q9Y5F9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
PCDHGB6Q9Y5F9 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB6Q9Y5F9 AC092368.3-202ENST00000574180 1591 ntBASIC18.73■□□□□ 0.59
PCDHGB6Q9Y5F9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB6Q9Y5F9 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB6Q9Y5F9 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PCDHGB6Q9Y5F9 RPS2P52-201ENST00000469610 820 ntBASIC18.73■□□□□ 0.59
PCDHGB6Q9Y5F9 AC142381.4-202ENST00000563973 229 ntBASIC18.73■□□□□ 0.59
PCDHGB6Q9Y5F9 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PCDHGB6Q9Y5F9 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB6Q9Y5F9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB6Q9Y5F9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHGB6Q9Y5F9 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHGB6Q9Y5F9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGB6Q9Y5F9 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 PLK5-205ENST00000642079 1969 ntBASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGB6Q9Y5F9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB6Q9Y5F9 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PCDHGB6Q9Y5F9 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
PCDHGB6Q9Y5F9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB6Q9Y5F9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB6Q9Y5F9 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PCDHGB6Q9Y5F9 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGB6Q9Y5F9 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms