Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDHB11Q9Y5F2 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHB11Q9Y5F2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDHB11Q9Y5F2 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB11Q9Y5F2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB11Q9Y5F2 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB11Q9Y5F2 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB11Q9Y5F2 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHB11Q9Y5F2 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
PCDHB11Q9Y5F2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB11Q9Y5F2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
PCDHB11Q9Y5F2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHB11Q9Y5F2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB11Q9Y5F2 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB11Q9Y5F2 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PCDHB11Q9Y5F2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHB11Q9Y5F2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB11Q9Y5F2 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
PCDHB11Q9Y5F2 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
PCDHB11Q9Y5F2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB11Q9Y5F2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PCDHB11Q9Y5F2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHB11Q9Y5F2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
PCDHB11Q9Y5F2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB11Q9Y5F2 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB11Q9Y5F2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB11Q9Y5F2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB11Q9Y5F2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PCDHB11Q9Y5F2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PCDHB11Q9Y5F2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PCDHB11Q9Y5F2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB11Q9Y5F2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB11Q9Y5F2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PCDHB11Q9Y5F2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB11Q9Y5F2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB11Q9Y5F2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB11Q9Y5F2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
PCDHB11Q9Y5F2 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB11Q9Y5F2 AC069544.1-201ENST00000609399 999 ntBASIC19.47■□□□□ 0.71
PCDHB11Q9Y5F2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
PCDHB11Q9Y5F2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB11Q9Y5F2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PCDHB11Q9Y5F2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHB11Q9Y5F2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB11Q9Y5F2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB11Q9Y5F2 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB11Q9Y5F2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHB11Q9Y5F2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PCDHB11Q9Y5F2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB11Q9Y5F2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB11Q9Y5F2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB11Q9Y5F2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB11Q9Y5F2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB11Q9Y5F2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB11Q9Y5F2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB11Q9Y5F2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB11Q9Y5F2 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB11Q9Y5F2 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB11Q9Y5F2 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB11Q9Y5F2 POM121L13P-201ENST00000422362 380 ntBASIC19.46■□□□□ 0.71
PCDHB11Q9Y5F2 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB11Q9Y5F2 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHB11Q9Y5F2 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.46■□□□□ 0.71
PCDHB11Q9Y5F2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB11Q9Y5F2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB11Q9Y5F2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHB11Q9Y5F2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHB11Q9Y5F2 DPP3P2-201ENST00000416030 1696 ntBASIC19.46■□□□□ 0.71
PCDHB11Q9Y5F2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB11Q9Y5F2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHB11Q9Y5F2 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB11Q9Y5F2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB11Q9Y5F2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB11Q9Y5F2 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB11Q9Y5F2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
PCDHB11Q9Y5F2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB11Q9Y5F2 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.45■□□□□ 0.7
PCDHB11Q9Y5F2 SNORA78-201ENST00000459373 127 ntBASIC19.45■□□□□ 0.7
PCDHB11Q9Y5F2 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHB11Q9Y5F2 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.45■□□□□ 0.7
PCDHB11Q9Y5F2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDHB11Q9Y5F2 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.45■□□□□ 0.7
PCDHB11Q9Y5F2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB11Q9Y5F2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PCDHB11Q9Y5F2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHB11Q9Y5F2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB11Q9Y5F2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB11Q9Y5F2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHB11Q9Y5F2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHB11Q9Y5F2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PCDHB11Q9Y5F2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB11Q9Y5F2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PCDHB11Q9Y5F2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
PCDHB11Q9Y5F2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB11Q9Y5F2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHB11Q9Y5F2 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
PCDHB11Q9Y5F2 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHB11Q9Y5F2 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB11Q9Y5F2 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.44■□□□□ 0.7
PCDHB11Q9Y5F2 Z99916.2-201ENST00000604037 246 ntBASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms