Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPH3AQ9Y2J0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RPH3AQ9Y2J0 AL596275.1-201ENST00000423464 877 ntBASIC18.2■□□□□ 0.5
RPH3AQ9Y2J0 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
RPH3AQ9Y2J0 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RPH3AQ9Y2J0 AC026366.1-201ENST00000488803 879 ntBASIC18.2■□□□□ 0.5
RPH3AQ9Y2J0 UNC93B4-201ENST00000505679 747 ntBASIC18.2■□□□□ 0.5
RPH3AQ9Y2J0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RPH3AQ9Y2J0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.2■□□□□ 0.5
RPH3AQ9Y2J0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPH3AQ9Y2J0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPH3AQ9Y2J0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RPH3AQ9Y2J0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPH3AQ9Y2J0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPH3AQ9Y2J0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPH3AQ9Y2J0 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPH3AQ9Y2J0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
RPH3AQ9Y2J0 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RPH3AQ9Y2J0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RPH3AQ9Y2J0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.19■□□□□ 0.5
RPH3AQ9Y2J0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RPH3AQ9Y2J0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPH3AQ9Y2J0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.19■□□□□ 0.5
RPH3AQ9Y2J0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.19■□□□□ 0.5
RPH3AQ9Y2J0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPH3AQ9Y2J0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPH3AQ9Y2J0 AC006058.3-201ENST00000606217 1069 ntBASIC18.19■□□□□ 0.5
RPH3AQ9Y2J0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPH3AQ9Y2J0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.19■□□□□ 0.5
RPH3AQ9Y2J0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPH3AQ9Y2J0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPH3AQ9Y2J0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RPH3AQ9Y2J0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RPH3AQ9Y2J0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RPH3AQ9Y2J0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RPH3AQ9Y2J0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPH3AQ9Y2J0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPH3AQ9Y2J0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.18■□□□□ 0.5
RPH3AQ9Y2J0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPH3AQ9Y2J0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPH3AQ9Y2J0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPH3AQ9Y2J0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPH3AQ9Y2J0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RPH3AQ9Y2J0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.18■□□□□ 0.5
RPH3AQ9Y2J0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.18■□□□□ 0.5
RPH3AQ9Y2J0 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPH3AQ9Y2J0 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.18■□□□□ 0.5
RPH3AQ9Y2J0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPH3AQ9Y2J0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RPH3AQ9Y2J0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.18■□□□□ 0.5
RPH3AQ9Y2J0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RPH3AQ9Y2J0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
RPH3AQ9Y2J0 AC008403.3-201ENST00000598924 454 ntBASIC18.18■□□□□ 0.5
RPH3AQ9Y2J0 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RPH3AQ9Y2J0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.18■□□□□ 0.5
RPH3AQ9Y2J0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.18■□□□□ 0.5
RPH3AQ9Y2J0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.18■□□□□ 0.5
RPH3AQ9Y2J0 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPH3AQ9Y2J0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RPH3AQ9Y2J0 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPH3AQ9Y2J0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPH3AQ9Y2J0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RPH3AQ9Y2J0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.18■□□□□ 0.5
RPH3AQ9Y2J0 AC073130.3-201ENST00000624389 2278 ntBASIC18.18■□□□□ 0.5
RPH3AQ9Y2J0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RPH3AQ9Y2J0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
RPH3AQ9Y2J0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.17■□□□□ 0.5
RPH3AQ9Y2J0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPH3AQ9Y2J0 PTBP1P-201ENST00000554374 1601 ntBASIC18.17■□□□□ 0.5
RPH3AQ9Y2J0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.17■□□□□ 0.5
RPH3AQ9Y2J0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
RPH3AQ9Y2J0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
RPH3AQ9Y2J0 GCSHP5-201ENST00000443090 522 ntBASIC18.17■□□□□ 0.5
RPH3AQ9Y2J0 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RPH3AQ9Y2J0 AC023632.3-201ENST00000521633 145 ntBASIC18.17■□□□□ 0.5
RPH3AQ9Y2J0 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.17■□□□□ 0.5
RPH3AQ9Y2J0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.17■□□□□ 0.5
RPH3AQ9Y2J0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.17■□□□□ 0.5
RPH3AQ9Y2J0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPH3AQ9Y2J0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.17■□□□□ 0.5
RPH3AQ9Y2J0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.17■□□□□ 0.5
RPH3AQ9Y2J0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
RPH3AQ9Y2J0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.17■□□□□ 0.5
RPH3AQ9Y2J0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 HLA-G-202ENST00000376815 851 ntBASIC18.16■□□□□ 0.5
RPH3AQ9Y2J0 HLA-G-203ENST00000376818 1127 ntBASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms