Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS29Q9UBQ0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VPS29Q9UBQ0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.07■□□□□ 0.64
VPS29Q9UBQ0 RAP2CP1-201ENST00000605103 478 ntBASIC19.07■□□□□ 0.64
VPS29Q9UBQ0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VPS29Q9UBQ0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS29Q9UBQ0 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VPS29Q9UBQ0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS29Q9UBQ0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.07■□□□□ 0.64
VPS29Q9UBQ0 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VPS29Q9UBQ0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.07■□□□□ 0.64
VPS29Q9UBQ0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
VPS29Q9UBQ0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS29Q9UBQ0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VPS29Q9UBQ0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.06■□□□□ 0.64
VPS29Q9UBQ0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
VPS29Q9UBQ0 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS29Q9UBQ0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS29Q9UBQ0 MIR663A-201ENST00000385250 93 ntBASIC19.06■□□□□ 0.64
VPS29Q9UBQ0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VPS29Q9UBQ0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.06■□□□□ 0.64
VPS29Q9UBQ0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.06■□□□□ 0.64
VPS29Q9UBQ0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
VPS29Q9UBQ0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.06■□□□□ 0.64
VPS29Q9UBQ0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS29Q9UBQ0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VPS29Q9UBQ0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VPS29Q9UBQ0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.05■□□□□ 0.64
VPS29Q9UBQ0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VPS29Q9UBQ0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.05■□□□□ 0.64
VPS29Q9UBQ0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.05■□□□□ 0.64
VPS29Q9UBQ0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
VPS29Q9UBQ0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VPS29Q9UBQ0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.05■□□□□ 0.64
VPS29Q9UBQ0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.05■□□□□ 0.64
VPS29Q9UBQ0 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.05■□□□□ 0.64
VPS29Q9UBQ0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
VPS29Q9UBQ0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
VPS29Q9UBQ0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.05■□□□□ 0.64
VPS29Q9UBQ0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VPS29Q9UBQ0 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.05■□□□□ 0.64
VPS29Q9UBQ0 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.05■□□□□ 0.64
VPS29Q9UBQ0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VPS29Q9UBQ0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS29Q9UBQ0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.04■□□□□ 0.64
VPS29Q9UBQ0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS29Q9UBQ0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.04■□□□□ 0.64
VPS29Q9UBQ0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
VPS29Q9UBQ0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.04■□□□□ 0.64
VPS29Q9UBQ0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS29Q9UBQ0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.04■□□□□ 0.64
VPS29Q9UBQ0 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS29Q9UBQ0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS29Q9UBQ0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS29Q9UBQ0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS29Q9UBQ0 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VPS29Q9UBQ0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
VPS29Q9UBQ0 BX276092.2-201ENST00000417668 665 ntBASIC19.04■□□□□ 0.64
VPS29Q9UBQ0 CROCCP5-201ENST00000436658 830 ntBASIC19.04■□□□□ 0.64
VPS29Q9UBQ0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.04■□□□□ 0.64
VPS29Q9UBQ0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.04■□□□□ 0.64
VPS29Q9UBQ0 AP001271.2-201ENST00000624018 1556 ntBASIC19.04■□□□□ 0.64
VPS29Q9UBQ0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.04■□□□□ 0.64
VPS29Q9UBQ0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS29Q9UBQ0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.04■□□□□ 0.64
VPS29Q9UBQ0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
VPS29Q9UBQ0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
VPS29Q9UBQ0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.04■□□□□ 0.64
VPS29Q9UBQ0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.04■□□□□ 0.64
VPS29Q9UBQ0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS29Q9UBQ0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS29Q9UBQ0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.03■□□□□ 0.64
VPS29Q9UBQ0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.03■□□□□ 0.64
VPS29Q9UBQ0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.03■□□□□ 0.64
VPS29Q9UBQ0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS29Q9UBQ0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
VPS29Q9UBQ0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.03■□□□□ 0.64
VPS29Q9UBQ0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VPS29Q9UBQ0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS29Q9UBQ0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
VPS29Q9UBQ0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VPS29Q9UBQ0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
VPS29Q9UBQ0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS29Q9UBQ0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS29Q9UBQ0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS29Q9UBQ0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS29Q9UBQ0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.03■□□□□ 0.64
VPS29Q9UBQ0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS29Q9UBQ0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.02■□□□□ 0.64
VPS29Q9UBQ0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS29Q9UBQ0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
VPS29Q9UBQ0 GPX1P1-201ENST00000388829 606 ntBASIC19.02■□□□□ 0.64
VPS29Q9UBQ0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.02■□□□□ 0.64
VPS29Q9UBQ0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.02■□□□□ 0.64
VPS29Q9UBQ0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
VPS29Q9UBQ0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
VPS29Q9UBQ0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.02■□□□□ 0.64
VPS29Q9UBQ0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
VPS29Q9UBQ0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.02■□□□□ 0.64
VPS29Q9UBQ0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms