Protein–RNA interactions for Protein: Q9P2K6

KLHL42, Kelch-like protein 42, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42Q9P2K6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KLHL42Q9P2K6 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.46■□□□□ 0.71
KLHL42Q9P2K6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
KLHL42Q9P2K6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
KLHL42Q9P2K6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KLHL42Q9P2K6 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.46■□□□□ 0.71
KLHL42Q9P2K6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KLHL42Q9P2K6 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KLHL42Q9P2K6 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.46■□□□□ 0.71
KLHL42Q9P2K6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.45■□□□□ 0.7
KLHL42Q9P2K6 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KLHL42Q9P2K6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
KLHL42Q9P2K6 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.45■□□□□ 0.7
KLHL42Q9P2K6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KLHL42Q9P2K6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KLHL42Q9P2K6 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.45■□□□□ 0.7
KLHL42Q9P2K6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.45■□□□□ 0.7
KLHL42Q9P2K6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.45■□□□□ 0.7
KLHL42Q9P2K6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.45■□□□□ 0.7
KLHL42Q9P2K6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KLHL42Q9P2K6 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KLHL42Q9P2K6 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KLHL42Q9P2K6 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.45■□□□□ 0.7
KLHL42Q9P2K6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KLHL42Q9P2K6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.45■□□□□ 0.7
KLHL42Q9P2K6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
KLHL42Q9P2K6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KLHL42Q9P2K6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL42Q9P2K6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL42Q9P2K6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.44■□□□□ 0.7
KLHL42Q9P2K6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
KLHL42Q9P2K6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL42Q9P2K6 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL42Q9P2K6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.44■□□□□ 0.7
KLHL42Q9P2K6 AC018553.1-201ENST00000616682 1458 ntBASIC19.44■□□□□ 0.7
KLHL42Q9P2K6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.44■□□□□ 0.7
KLHL42Q9P2K6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.44■□□□□ 0.7
KLHL42Q9P2K6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
KLHL42Q9P2K6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.44■□□□□ 0.7
KLHL42Q9P2K6 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.44■□□□□ 0.7
KLHL42Q9P2K6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.44■□□□□ 0.7
KLHL42Q9P2K6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.44■□□□□ 0.7
KLHL42Q9P2K6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL42Q9P2K6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL42Q9P2K6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL42Q9P2K6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL42Q9P2K6 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.44■□□□□ 0.7
KLHL42Q9P2K6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL42Q9P2K6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL42Q9P2K6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.44■□□□□ 0.7
KLHL42Q9P2K6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL42Q9P2K6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL42Q9P2K6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KLHL42Q9P2K6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KLHL42Q9P2K6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.43■□□□□ 0.7
KLHL42Q9P2K6 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
KLHL42Q9P2K6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KLHL42Q9P2K6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KLHL42Q9P2K6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
KLHL42Q9P2K6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.43■□□□□ 0.7
KLHL42Q9P2K6 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.43■□□□□ 0.7
KLHL42Q9P2K6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.43■□□□□ 0.7
KLHL42Q9P2K6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.43■□□□□ 0.7
KLHL42Q9P2K6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.43■□□□□ 0.7
KLHL42Q9P2K6 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KLHL42Q9P2K6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.43■□□□□ 0.7
KLHL42Q9P2K6 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.43■□□□□ 0.7
KLHL42Q9P2K6 TFP1-202ENST00000475455 1573 ntBASIC19.43■□□□□ 0.7
KLHL42Q9P2K6 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KLHL42Q9P2K6 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KLHL42Q9P2K6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KLHL42Q9P2K6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.42■□□□□ 0.7
KLHL42Q9P2K6 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
KLHL42Q9P2K6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KLHL42Q9P2K6 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
KLHL42Q9P2K6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KLHL42Q9P2K6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.42■□□□□ 0.7
KLHL42Q9P2K6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.42■□□□□ 0.7
KLHL42Q9P2K6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KLHL42Q9P2K6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.42■□□□□ 0.7
KLHL42Q9P2K6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
KLHL42Q9P2K6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
KLHL42Q9P2K6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.42■□□□□ 0.7
KLHL42Q9P2K6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KLHL42Q9P2K6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KLHL42Q9P2K6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.42■□□□□ 0.7
KLHL42Q9P2K6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.42■□□□□ 0.7
KLHL42Q9P2K6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.42■□□□□ 0.7
KLHL42Q9P2K6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.42■□□□□ 0.7
KLHL42Q9P2K6 AC006557.6-201ENST00000623071 864 ntBASIC19.42■□□□□ 0.7
KLHL42Q9P2K6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KLHL42Q9P2K6 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.42■□□□□ 0.7
KLHL42Q9P2K6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.42■□□□□ 0.7
KLHL42Q9P2K6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KLHL42Q9P2K6 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.42■□□□□ 0.7
KLHL42Q9P2K6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KLHL42Q9P2K6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.42■□□□□ 0.7
KLHL42Q9P2K6 AC125437.2-201ENST00000625180 2167 ntBASIC19.42■□□□□ 0.7
KLHL42Q9P2K6 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
KLHL42Q9P2K6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms