Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDE1Q9NXR1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NDE1Q9NXR1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NDE1Q9NXR1 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.21■□□□□ 0.67
NDE1Q9NXR1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDE1Q9NXR1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NDE1Q9NXR1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDE1Q9NXR1 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NDE1Q9NXR1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDE1Q9NXR1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
NDE1Q9NXR1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.21■□□□□ 0.67
NDE1Q9NXR1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDE1Q9NXR1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.21■□□□□ 0.67
NDE1Q9NXR1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.21■□□□□ 0.67
NDE1Q9NXR1 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDE1Q9NXR1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDE1Q9NXR1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDE1Q9NXR1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDE1Q9NXR1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDE1Q9NXR1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NDE1Q9NXR1 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDE1Q9NXR1 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
NDE1Q9NXR1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
NDE1Q9NXR1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.2■□□□□ 0.66
NDE1Q9NXR1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NDE1Q9NXR1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NDE1Q9NXR1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NDE1Q9NXR1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
NDE1Q9NXR1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
NDE1Q9NXR1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.2■□□□□ 0.66
NDE1Q9NXR1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
NDE1Q9NXR1 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NDE1Q9NXR1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NDE1Q9NXR1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NDE1Q9NXR1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.2■□□□□ 0.66
NDE1Q9NXR1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDE1Q9NXR1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
NDE1Q9NXR1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDE1Q9NXR1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NDE1Q9NXR1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NDE1Q9NXR1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDE1Q9NXR1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NDE1Q9NXR1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.19■□□□□ 0.66
NDE1Q9NXR1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.19■□□□□ 0.66
NDE1Q9NXR1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDE1Q9NXR1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDE1Q9NXR1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.19■□□□□ 0.66
NDE1Q9NXR1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NDE1Q9NXR1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDE1Q9NXR1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
NDE1Q9NXR1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.19■□□□□ 0.66
NDE1Q9NXR1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDE1Q9NXR1 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.19■□□□□ 0.66
NDE1Q9NXR1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDE1Q9NXR1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDE1Q9NXR1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDE1Q9NXR1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
NDE1Q9NXR1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.19■□□□□ 0.66
NDE1Q9NXR1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NDE1Q9NXR1 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDE1Q9NXR1 LTB4R2-202ENST00000528054 3092 ntBASIC19.19■□□□□ 0.66
NDE1Q9NXR1 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDE1Q9NXR1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDE1Q9NXR1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDE1Q9NXR1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.18■□□□□ 0.66
NDE1Q9NXR1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NDE1Q9NXR1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.18■□□□□ 0.66
NDE1Q9NXR1 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NDE1Q9NXR1 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDE1Q9NXR1 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NDE1Q9NXR1 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.18■□□□□ 0.66
NDE1Q9NXR1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDE1Q9NXR1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NDE1Q9NXR1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NDE1Q9NXR1 MIR4767-201ENST00000582827 78 ntBASIC19.18■□□□□ 0.66
NDE1Q9NXR1 MIR4466-201ENST00000606121 54 ntBASIC19.18■□□□□ 0.66
NDE1Q9NXR1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
NDE1Q9NXR1 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NDE1Q9NXR1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDE1Q9NXR1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NDE1Q9NXR1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
NDE1Q9NXR1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDE1Q9NXR1 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NDE1Q9NXR1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
NDE1Q9NXR1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NDE1Q9NXR1 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
NDE1Q9NXR1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NDE1Q9NXR1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDE1Q9NXR1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDE1Q9NXR1 LINC01465-201ENST00000408887 1940 ntBASIC19.17■□□□□ 0.66
NDE1Q9NXR1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NDE1Q9NXR1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDE1Q9NXR1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDE1Q9NXR1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDE1Q9NXR1 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.17■□□□□ 0.66
NDE1Q9NXR1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.17■□□□□ 0.66
NDE1Q9NXR1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NDE1Q9NXR1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NDE1Q9NXR1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDE1Q9NXR1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms