Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
HCFC1R1Q9NWW0 AC026310.3-201ENST00000625186 2373 ntBASIC20.73■□□□□ 0.91
HCFC1R1Q9NWW0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
HCFC1R1Q9NWW0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.73■□□□□ 0.91
HCFC1R1Q9NWW0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HCFC1R1Q9NWW0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HCFC1R1Q9NWW0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HCFC1R1Q9NWW0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HCFC1R1Q9NWW0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
HCFC1R1Q9NWW0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HCFC1R1Q9NWW0 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
HCFC1R1Q9NWW0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HCFC1R1Q9NWW0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HCFC1R1Q9NWW0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HCFC1R1Q9NWW0 KRT18P57-201ENST00000443599 1254 ntBASIC20.72■□□□□ 0.91
HCFC1R1Q9NWW0 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.72■□□□□ 0.91
HCFC1R1Q9NWW0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
HCFC1R1Q9NWW0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.72■□□□□ 0.91
HCFC1R1Q9NWW0 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.72■□□□□ 0.91
HCFC1R1Q9NWW0 NAPSB-206ENST00000562112 1266 ntBASIC20.72■□□□□ 0.91
HCFC1R1Q9NWW0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HCFC1R1Q9NWW0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.72■□□□□ 0.91
HCFC1R1Q9NWW0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HCFC1R1Q9NWW0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
HCFC1R1Q9NWW0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
HCFC1R1Q9NWW0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
HCFC1R1Q9NWW0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HCFC1R1Q9NWW0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HCFC1R1Q9NWW0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HCFC1R1Q9NWW0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HCFC1R1Q9NWW0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HCFC1R1Q9NWW0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.72■□□□□ 0.91
HCFC1R1Q9NWW0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.72■□□□□ 0.91
HCFC1R1Q9NWW0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HCFC1R1Q9NWW0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.71■□□□□ 0.91
HCFC1R1Q9NWW0 AC007225.1-201ENST00000566331 1836 ntBASIC20.71■□□□□ 0.91
HCFC1R1Q9NWW0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
HCFC1R1Q9NWW0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.71■□□□□ 0.91
HCFC1R1Q9NWW0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.71■□□□□ 0.91
HCFC1R1Q9NWW0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HCFC1R1Q9NWW0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HCFC1R1Q9NWW0 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HCFC1R1Q9NWW0 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.71■□□□□ 0.91
HCFC1R1Q9NWW0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.71■□□□□ 0.91
HCFC1R1Q9NWW0 C1QL1P1-201ENST00000568105 661 ntBASIC20.71■□□□□ 0.91
HCFC1R1Q9NWW0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.71■□□□□ 0.91
HCFC1R1Q9NWW0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
HCFC1R1Q9NWW0 LINC00565-201ENST00000562710 2331 ntBASIC20.71■□□□□ 0.91
HCFC1R1Q9NWW0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
HCFC1R1Q9NWW0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.7■□□□□ 0.9
HCFC1R1Q9NWW0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HCFC1R1Q9NWW0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.7■□□□□ 0.9
HCFC1R1Q9NWW0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.7■□□□□ 0.9
HCFC1R1Q9NWW0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.7■□□□□ 0.9
HCFC1R1Q9NWW0 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.7■□□□□ 0.9
HCFC1R1Q9NWW0 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.7■□□□□ 0.9
HCFC1R1Q9NWW0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
HCFC1R1Q9NWW0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HCFC1R1Q9NWW0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.7■□□□□ 0.9
HCFC1R1Q9NWW0 AL049597.2-201ENST00000565575 961 ntBASIC20.7■□□□□ 0.9
HCFC1R1Q9NWW0 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.7■□□□□ 0.9
HCFC1R1Q9NWW0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
HCFC1R1Q9NWW0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HCFC1R1Q9NWW0 AC116351.2-201ENST00000606540 1585 ntBASIC20.7■□□□□ 0.9
HCFC1R1Q9NWW0 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.7■□□□□ 0.9
HCFC1R1Q9NWW0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.7■□□□□ 0.9
HCFC1R1Q9NWW0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HCFC1R1Q9NWW0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.7■□□□□ 0.9
HCFC1R1Q9NWW0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HCFC1R1Q9NWW0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HCFC1R1Q9NWW0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HCFC1R1Q9NWW0 MESTP1-201ENST00000404287 994 ntBASIC20.69■□□□□ 0.9
HCFC1R1Q9NWW0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.69■□□□□ 0.9
HCFC1R1Q9NWW0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.69■□□□□ 0.9
HCFC1R1Q9NWW0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HCFC1R1Q9NWW0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HCFC1R1Q9NWW0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HCFC1R1Q9NWW0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HCFC1R1Q9NWW0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HCFC1R1Q9NWW0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.69■□□□□ 0.9
HCFC1R1Q9NWW0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.69■□□□□ 0.9
HCFC1R1Q9NWW0 AC018553.1-201ENST00000616682 1458 ntBASIC20.69■□□□□ 0.9
HCFC1R1Q9NWW0 TFP1-202ENST00000475455 1573 ntBASIC20.68■□□□□ 0.9
HCFC1R1Q9NWW0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HCFC1R1Q9NWW0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HCFC1R1Q9NWW0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.68■□□□□ 0.9
HCFC1R1Q9NWW0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.68■□□□□ 0.9
HCFC1R1Q9NWW0 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.68■□□□□ 0.9
HCFC1R1Q9NWW0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.68■□□□□ 0.9
HCFC1R1Q9NWW0 AC113347.1-201ENST00000413321 391 ntBASIC20.68■□□□□ 0.9
HCFC1R1Q9NWW0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.68■□□□□ 0.9
HCFC1R1Q9NWW0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.68■□□□□ 0.9
HCFC1R1Q9NWW0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.68■□□□□ 0.9
HCFC1R1Q9NWW0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.68■□□□□ 0.9
HCFC1R1Q9NWW0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.68■□□□□ 0.9
HCFC1R1Q9NWW0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HCFC1R1Q9NWW0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
HCFC1R1Q9NWW0 AL031985.4-201ENST00000642138 673 ntBASIC20.68■□□□□ 0.9
HCFC1R1Q9NWW0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
HCFC1R1Q9NWW0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms