Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.24■□□□□ 0.51
SDHAF3Q9NRP4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.24■□□□□ 0.51
SDHAF3Q9NRP4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SDHAF3Q9NRP4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
SDHAF3Q9NRP4 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.24■□□□□ 0.51
SDHAF3Q9NRP4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SDHAF3Q9NRP4 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.24■□□□□ 0.51
SDHAF3Q9NRP4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SDHAF3Q9NRP4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.24■□□□□ 0.51
SDHAF3Q9NRP4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
SDHAF3Q9NRP4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SDHAF3Q9NRP4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SDHAF3Q9NRP4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SDHAF3Q9NRP4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.23■□□□□ 0.51
SDHAF3Q9NRP4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SDHAF3Q9NRP4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SDHAF3Q9NRP4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.23■□□□□ 0.51
SDHAF3Q9NRP4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SDHAF3Q9NRP4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SDHAF3Q9NRP4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SDHAF3Q9NRP4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SDHAF3Q9NRP4 AL162377.1-201ENST00000618844 1793 ntBASIC18.23■□□□□ 0.51
SDHAF3Q9NRP4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.23■□□□□ 0.51
SDHAF3Q9NRP4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SDHAF3Q9NRP4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.23■□□□□ 0.51
SDHAF3Q9NRP4 AP003097.1-201ENST00000530657 1135 ntBASIC18.23■□□□□ 0.51
SDHAF3Q9NRP4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.23■□□□□ 0.51
SDHAF3Q9NRP4 AC008687.6-201ENST00000596318 630 ntBASIC18.23■□□□□ 0.51
SDHAF3Q9NRP4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.23■□□□□ 0.51
SDHAF3Q9NRP4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SDHAF3Q9NRP4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SDHAF3Q9NRP4 AL512408.1-201ENST00000569378 2000 ntBASIC18.23■□□□□ 0.51
SDHAF3Q9NRP4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
SDHAF3Q9NRP4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.23■□□□□ 0.51
SDHAF3Q9NRP4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SDHAF3Q9NRP4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SDHAF3Q9NRP4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SDHAF3Q9NRP4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SDHAF3Q9NRP4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SDHAF3Q9NRP4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SDHAF3Q9NRP4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.23■□□□□ 0.51
SDHAF3Q9NRP4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SDHAF3Q9NRP4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SDHAF3Q9NRP4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SDHAF3Q9NRP4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.22■□□□□ 0.51
SDHAF3Q9NRP4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SDHAF3Q9NRP4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SDHAF3Q9NRP4 KRT17P3-201ENST00000420566 1262 ntBASIC18.22■□□□□ 0.51
SDHAF3Q9NRP4 AC026366.1-201ENST00000488803 879 ntBASIC18.22■□□□□ 0.51
SDHAF3Q9NRP4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.22■□□□□ 0.51
SDHAF3Q9NRP4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.22■□□□□ 0.51
SDHAF3Q9NRP4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SDHAF3Q9NRP4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.22■□□□□ 0.51
SDHAF3Q9NRP4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.22■□□□□ 0.51
SDHAF3Q9NRP4 AC120498.8-201ENST00000614275 531 ntBASIC18.22■□□□□ 0.51
SDHAF3Q9NRP4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.22■□□□□ 0.51
SDHAF3Q9NRP4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SDHAF3Q9NRP4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SDHAF3Q9NRP4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SDHAF3Q9NRP4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SDHAF3Q9NRP4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SDHAF3Q9NRP4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.22■□□□□ 0.51
SDHAF3Q9NRP4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
SDHAF3Q9NRP4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SDHAF3Q9NRP4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.22■□□□□ 0.51
SDHAF3Q9NRP4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SDHAF3Q9NRP4 BX119927.1-201ENST00000636596 1552 ntBASIC18.21■□□□□ 0.51
SDHAF3Q9NRP4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SDHAF3Q9NRP4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SDHAF3Q9NRP4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SDHAF3Q9NRP4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.21■□□□□ 0.51
SDHAF3Q9NRP4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SDHAF3Q9NRP4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.21■□□□□ 0.51
SDHAF3Q9NRP4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SDHAF3Q9NRP4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SDHAF3Q9NRP4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.21■□□□□ 0.51
SDHAF3Q9NRP4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SDHAF3Q9NRP4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SDHAF3Q9NRP4 FAM201B-201ENST00000458407 597 ntBASIC18.21■□□□□ 0.51
SDHAF3Q9NRP4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.21■□□□□ 0.51
SDHAF3Q9NRP4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.21■□□□□ 0.51
SDHAF3Q9NRP4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.21■□□□□ 0.51
SDHAF3Q9NRP4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SDHAF3Q9NRP4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SDHAF3Q9NRP4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SDHAF3Q9NRP4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SDHAF3Q9NRP4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SDHAF3Q9NRP4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.21■□□□□ 0.51
SDHAF3Q9NRP4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SDHAF3Q9NRP4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.21■□□□□ 0.51
SDHAF3Q9NRP4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
SDHAF3Q9NRP4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SDHAF3Q9NRP4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SDHAF3Q9NRP4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SDHAF3Q9NRP4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.2■□□□□ 0.5
SDHAF3Q9NRP4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SDHAF3Q9NRP4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.2■□□□□ 0.5
SDHAF3Q9NRP4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SDHAF3Q9NRP4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SDHAF3Q9NRP4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms