Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
MKKSQ9NPJ1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MKKSQ9NPJ1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.83■□□□□ 0.6
MKKSQ9NPJ1 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MKKSQ9NPJ1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.83■□□□□ 0.6
MKKSQ9NPJ1 FAM197Y4-202ENST00000622692 608 ntBASIC18.83■□□□□ 0.6
MKKSQ9NPJ1 AC066615.1-201ENST00000640911 628 ntBASIC18.83■□□□□ 0.6
MKKSQ9NPJ1 AP006294.2-201ENST00000641667 209 ntBASIC18.83■□□□□ 0.6
MKKSQ9NPJ1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.83■□□□□ 0.6
MKKSQ9NPJ1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MKKSQ9NPJ1 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MKKSQ9NPJ1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.83■□□□□ 0.6
MKKSQ9NPJ1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MKKSQ9NPJ1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
MKKSQ9NPJ1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
MKKSQ9NPJ1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
MKKSQ9NPJ1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MKKSQ9NPJ1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
MKKSQ9NPJ1 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MKKSQ9NPJ1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
MKKSQ9NPJ1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MKKSQ9NPJ1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MKKSQ9NPJ1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.82■□□□□ 0.6
MKKSQ9NPJ1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MKKSQ9NPJ1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.82■□□□□ 0.6
MKKSQ9NPJ1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MKKSQ9NPJ1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.82■□□□□ 0.6
MKKSQ9NPJ1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.82■□□□□ 0.6
MKKSQ9NPJ1 PRKY-204ENST00000533551 1019 ntBASIC18.82■□□□□ 0.6
MKKSQ9NPJ1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MKKSQ9NPJ1 AL121829.2-201ENST00000620908 328 ntBASIC18.82■□□□□ 0.6
MKKSQ9NPJ1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MKKSQ9NPJ1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
MKKSQ9NPJ1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MKKSQ9NPJ1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.82■□□□□ 0.6
MKKSQ9NPJ1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MKKSQ9NPJ1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MKKSQ9NPJ1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.81■□□□□ 0.6
MKKSQ9NPJ1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MKKSQ9NPJ1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MKKSQ9NPJ1 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
MKKSQ9NPJ1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
MKKSQ9NPJ1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MKKSQ9NPJ1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MKKSQ9NPJ1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MKKSQ9NPJ1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
MKKSQ9NPJ1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
MKKSQ9NPJ1 UBE2SP1-201ENST00000450587 669 ntBASIC18.81■□□□□ 0.6
MKKSQ9NPJ1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.81■□□□□ 0.6
MKKSQ9NPJ1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.81■□□□□ 0.6
MKKSQ9NPJ1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
MKKSQ9NPJ1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.81■□□□□ 0.6
MKKSQ9NPJ1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MKKSQ9NPJ1 AL121906.2-201ENST00000621597 723 ntBASIC18.81■□□□□ 0.6
MKKSQ9NPJ1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MKKSQ9NPJ1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
MKKSQ9NPJ1 LINC01006-201ENST00000333319 2292 ntBASIC18.81■□□□□ 0.6
MKKSQ9NPJ1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
MKKSQ9NPJ1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MKKSQ9NPJ1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MKKSQ9NPJ1 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MKKSQ9NPJ1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
MKKSQ9NPJ1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
MKKSQ9NPJ1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
MKKSQ9NPJ1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
MKKSQ9NPJ1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MKKSQ9NPJ1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MKKSQ9NPJ1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MKKSQ9NPJ1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MKKSQ9NPJ1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MKKSQ9NPJ1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MKKSQ9NPJ1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.8■□□□□ 0.6
MKKSQ9NPJ1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MKKSQ9NPJ1 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.8■□□□□ 0.6
MKKSQ9NPJ1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.8■□□□□ 0.6
MKKSQ9NPJ1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.8■□□□□ 0.6
MKKSQ9NPJ1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.8■□□□□ 0.6
MKKSQ9NPJ1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.8■□□□□ 0.6
MKKSQ9NPJ1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.8■□□□□ 0.6
MKKSQ9NPJ1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MKKSQ9NPJ1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MKKSQ9NPJ1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MKKSQ9NPJ1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
MKKSQ9NPJ1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
MKKSQ9NPJ1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
MKKSQ9NPJ1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.79■□□□□ 0.6
MKKSQ9NPJ1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
MKKSQ9NPJ1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
MKKSQ9NPJ1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MKKSQ9NPJ1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MKKSQ9NPJ1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MKKSQ9NPJ1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MKKSQ9NPJ1 AC239809.2-201ENST00000415381 517 ntBASIC18.79■□□□□ 0.6
MKKSQ9NPJ1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.79■□□□□ 0.6
MKKSQ9NPJ1 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
MKKSQ9NPJ1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.79■□□□□ 0.6
MKKSQ9NPJ1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
MKKSQ9NPJ1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.79■□□□□ 0.6
MKKSQ9NPJ1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.79■□□□□ 0.6
MKKSQ9NPJ1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms