Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
NELFAQ9H3P2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NELFAQ9H3P2 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.71■□□□□ 0.43
NELFAQ9H3P2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.71■□□□□ 0.43
NELFAQ9H3P2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
NELFAQ9H3P2 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NELFAQ9H3P2 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
NELFAQ9H3P2 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
NELFAQ9H3P2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.71■□□□□ 0.42
NELFAQ9H3P2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
NELFAQ9H3P2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NELFAQ9H3P2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NELFAQ9H3P2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
NELFAQ9H3P2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NELFAQ9H3P2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NELFAQ9H3P2 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NELFAQ9H3P2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NELFAQ9H3P2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
NELFAQ9H3P2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NELFAQ9H3P2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.7■□□□□ 0.42
NELFAQ9H3P2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NELFAQ9H3P2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.7■□□□□ 0.42
NELFAQ9H3P2 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NELFAQ9H3P2 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NELFAQ9H3P2 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.7■□□□□ 0.42
NELFAQ9H3P2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.7■□□□□ 0.42
NELFAQ9H3P2 KRT18P6-201ENST00000555540 1265 ntBASIC17.7■□□□□ 0.42
NELFAQ9H3P2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.7■□□□□ 0.42
NELFAQ9H3P2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NELFAQ9H3P2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NELFAQ9H3P2 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NELFAQ9H3P2 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NELFAQ9H3P2 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NELFAQ9H3P2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.7■□□□□ 0.42
NELFAQ9H3P2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NELFAQ9H3P2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
NELFAQ9H3P2 AC112907.3-201ENST00000577781 2400 ntBASIC17.7■□□□□ 0.42
NELFAQ9H3P2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NELFAQ9H3P2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
NELFAQ9H3P2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.7■□□□□ 0.42
NELFAQ9H3P2 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
NELFAQ9H3P2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
NELFAQ9H3P2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NELFAQ9H3P2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
NELFAQ9H3P2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NELFAQ9H3P2 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NELFAQ9H3P2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
NELFAQ9H3P2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NELFAQ9H3P2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.69■□□□□ 0.42
NELFAQ9H3P2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NELFAQ9H3P2 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.69■□□□□ 0.42
NELFAQ9H3P2 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NELFAQ9H3P2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
NELFAQ9H3P2 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.69■□□□□ 0.42
NELFAQ9H3P2 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.69■□□□□ 0.42
NELFAQ9H3P2 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.69■□□□□ 0.42
NELFAQ9H3P2 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
NELFAQ9H3P2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NELFAQ9H3P2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
NELFAQ9H3P2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.69■□□□□ 0.42
NELFAQ9H3P2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NELFAQ9H3P2 BX119927.1-201ENST00000636596 1552 ntBASIC17.69■□□□□ 0.42
NELFAQ9H3P2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
NELFAQ9H3P2 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NELFAQ9H3P2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
NELFAQ9H3P2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
NELFAQ9H3P2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NELFAQ9H3P2 PTBP1P-201ENST00000554374 1601 ntBASIC17.69■□□□□ 0.42
NELFAQ9H3P2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.69■□□□□ 0.42
NELFAQ9H3P2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NELFAQ9H3P2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NELFAQ9H3P2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NELFAQ9H3P2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NELFAQ9H3P2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NELFAQ9H3P2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NELFAQ9H3P2 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NELFAQ9H3P2 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NELFAQ9H3P2 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NELFAQ9H3P2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NELFAQ9H3P2 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NELFAQ9H3P2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.68■□□□□ 0.42
NELFAQ9H3P2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NELFAQ9H3P2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NELFAQ9H3P2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NELFAQ9H3P2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.68■□□□□ 0.42
NELFAQ9H3P2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.68■□□□□ 0.42
NELFAQ9H3P2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
NELFAQ9H3P2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.68■□□□□ 0.42
NELFAQ9H3P2 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.68■□□□□ 0.42
NELFAQ9H3P2 TCF3P1-201ENST00000423021 1937 ntBASIC17.68■□□□□ 0.42
NELFAQ9H3P2 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NELFAQ9H3P2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.68■□□□□ 0.42
NELFAQ9H3P2 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NELFAQ9H3P2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.68■□□□□ 0.42
NELFAQ9H3P2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
NELFAQ9H3P2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
NELFAQ9H3P2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.68■□□□□ 0.42
NELFAQ9H3P2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
NELFAQ9H3P2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NELFAQ9H3P2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms