Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VCX3BQ9H321 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
VCX3BQ9H321 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VCX3BQ9H321 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VCX3BQ9H321 AC021242.3-201ENST00000607598 1377 ntBASIC18.93■□□□□ 0.62
VCX3BQ9H321 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
VCX3BQ9H321 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VCX3BQ9H321 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
VCX3BQ9H321 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
VCX3BQ9H321 PCDHB18P-201ENST00000524813 2368 ntBASIC18.93■□□□□ 0.62
VCX3BQ9H321 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VCX3BQ9H321 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
VCX3BQ9H321 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VCX3BQ9H321 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.93■□□□□ 0.62
VCX3BQ9H321 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
VCX3BQ9H321 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VCX3BQ9H321 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
VCX3BQ9H321 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VCX3BQ9H321 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VCX3BQ9H321 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
VCX3BQ9H321 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VCX3BQ9H321 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.93■□□□□ 0.62
VCX3BQ9H321 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
VCX3BQ9H321 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
VCX3BQ9H321 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VCX3BQ9H321 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
VCX3BQ9H321 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VCX3BQ9H321 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VCX3BQ9H321 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
VCX3BQ9H321 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
VCX3BQ9H321 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
VCX3BQ9H321 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
VCX3BQ9H321 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VCX3BQ9H321 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VCX3BQ9H321 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VCX3BQ9H321 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.92■□□□□ 0.62
VCX3BQ9H321 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.92■□□□□ 0.62
VCX3BQ9H321 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
VCX3BQ9H321 MIR4449-201ENST00000578365 66 ntBASIC18.92■□□□□ 0.62
VCX3BQ9H321 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VCX3BQ9H321 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VCX3BQ9H321 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.92■□□□□ 0.62
VCX3BQ9H321 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VCX3BQ9H321 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.92■□□□□ 0.62
VCX3BQ9H321 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
VCX3BQ9H321 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
VCX3BQ9H321 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VCX3BQ9H321 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.92■□□□□ 0.62
VCX3BQ9H321 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VCX3BQ9H321 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCX3BQ9H321 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
VCX3BQ9H321 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VCX3BQ9H321 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VCX3BQ9H321 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
VCX3BQ9H321 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCX3BQ9H321 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VCX3BQ9H321 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
VCX3BQ9H321 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCX3BQ9H321 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
VCX3BQ9H321 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
VCX3BQ9H321 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCX3BQ9H321 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
VCX3BQ9H321 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCX3BQ9H321 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCX3BQ9H321 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCX3BQ9H321 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.91■□□□□ 0.62
VCX3BQ9H321 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCX3BQ9H321 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCX3BQ9H321 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
VCX3BQ9H321 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.91■□□□□ 0.62
VCX3BQ9H321 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.91■□□□□ 0.62
VCX3BQ9H321 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.91■□□□□ 0.62
VCX3BQ9H321 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCX3BQ9H321 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VCX3BQ9H321 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
VCX3BQ9H321 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCX3BQ9H321 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCX3BQ9H321 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VCX3BQ9H321 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
VCX3BQ9H321 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
VCX3BQ9H321 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.9■□□□□ 0.62
VCX3BQ9H321 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.9■□□□□ 0.62
VCX3BQ9H321 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VCX3BQ9H321 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VCX3BQ9H321 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VCX3BQ9H321 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
VCX3BQ9H321 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
VCX3BQ9H321 AL117332.1-201ENST00000622628 974 ntBASIC18.9■□□□□ 0.62
VCX3BQ9H321 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.9■□□□□ 0.62
VCX3BQ9H321 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
VCX3BQ9H321 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
VCX3BQ9H321 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VCX3BQ9H321 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VCX3BQ9H321 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.9■□□□□ 0.62
VCX3BQ9H321 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
VCX3BQ9H321 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.9■□□□□ 0.62
VCX3BQ9H321 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VCX3BQ9H321 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
VCX3BQ9H321 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.9■□□□□ 0.62
VCX3BQ9H321 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms