Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDT1Q9H211 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDT1Q9H211 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDT1Q9H211 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
CDT1Q9H211 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDT1Q9H211 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDT1Q9H211 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDT1Q9H211 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDT1Q9H211 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.58■■□□□ 1.05
CDT1Q9H211 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.58■■□□□ 1.05
CDT1Q9H211 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDT1Q9H211 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.58■■□□□ 1.05
CDT1Q9H211 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CDT1Q9H211 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDT1Q9H211 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDT1Q9H211 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.58■■□□□ 1.05
CDT1Q9H211 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDT1Q9H211 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.58■■□□□ 1.05
CDT1Q9H211 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CDT1Q9H211 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
CDT1Q9H211 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
CDT1Q9H211 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CDT1Q9H211 AL391422.3-201ENST00000603791 2761 ntBASIC21.58■■□□□ 1.04
CDT1Q9H211 TFP1-202ENST00000475455 1573 ntBASIC21.57■■□□□ 1.04
CDT1Q9H211 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDT1Q9H211 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDT1Q9H211 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.57■■□□□ 1.04
CDT1Q9H211 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDT1Q9H211 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDT1Q9H211 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.57■■□□□ 1.04
CDT1Q9H211 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDT1Q9H211 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDT1Q9H211 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDT1Q9H211 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.57■■□□□ 1.04
CDT1Q9H211 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.57■■□□□ 1.04
CDT1Q9H211 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDT1Q9H211 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDT1Q9H211 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.57■■□□□ 1.04
CDT1Q9H211 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDT1Q9H211 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDT1Q9H211 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDT1Q9H211 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
CDT1Q9H211 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDT1Q9H211 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.56■■□□□ 1.04
CDT1Q9H211 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDT1Q9H211 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.56■■□□□ 1.04
CDT1Q9H211 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDT1Q9H211 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.56■■□□□ 1.04
CDT1Q9H211 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDT1Q9H211 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
CDT1Q9H211 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CDT1Q9H211 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDT1Q9H211 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CDT1Q9H211 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
CDT1Q9H211 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.56■■□□□ 1.04
CDT1Q9H211 RPS2P4-201ENST00000476944 856 ntBASIC21.56■■□□□ 1.04
CDT1Q9H211 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
CDT1Q9H211 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDT1Q9H211 Z99916.2-201ENST00000604037 246 ntBASIC21.56■■□□□ 1.04
CDT1Q9H211 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDT1Q9H211 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.56■■□□□ 1.04
CDT1Q9H211 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDT1Q9H211 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDT1Q9H211 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDT1Q9H211 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.56■■□□□ 1.04
CDT1Q9H211 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDT1Q9H211 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDT1Q9H211 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.56■■□□□ 1.04
CDT1Q9H211 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.56■■□□□ 1.04
CDT1Q9H211 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDT1Q9H211 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDT1Q9H211 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDT1Q9H211 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CDT1Q9H211 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDT1Q9H211 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDT1Q9H211 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDT1Q9H211 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
CDT1Q9H211 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.55■■□□□ 1.04
CDT1Q9H211 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.55■■□□□ 1.04
CDT1Q9H211 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.55■■□□□ 1.04
CDT1Q9H211 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.55■■□□□ 1.04
CDT1Q9H211 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDT1Q9H211 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
CDT1Q9H211 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.55■■□□□ 1.04
CDT1Q9H211 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.55■■□□□ 1.04
CDT1Q9H211 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CDT1Q9H211 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDT1Q9H211 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.55■■□□□ 1.04
CDT1Q9H211 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.55■■□□□ 1.04
CDT1Q9H211 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.55■■□□□ 1.04
CDT1Q9H211 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDT1Q9H211 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDT1Q9H211 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDT1Q9H211 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.54■■□□□ 1.04
CDT1Q9H211 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.54■■□□□ 1.04
CDT1Q9H211 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.54■■□□□ 1.04
CDT1Q9H211 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDT1Q9H211 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CDT1Q9H211 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.54■■□□□ 1.04
CDT1Q9H211 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms