Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
NBPF3Q9H094 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC23.66■■□□□ 1.38
NBPF3Q9H094 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC23.66■■□□□ 1.38
NBPF3Q9H094 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
NBPF3Q9H094 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC23.66■■□□□ 1.38
NBPF3Q9H094 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NBPF3Q9H094 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC23.66■■□□□ 1.38
NBPF3Q9H094 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
NBPF3Q9H094 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
NBPF3Q9H094 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
NBPF3Q9H094 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NBPF3Q9H094 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC23.65■■□□□ 1.38
NBPF3Q9H094 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
NBPF3Q9H094 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
NBPF3Q9H094 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
NBPF3Q9H094 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC23.65■■□□□ 1.38
NBPF3Q9H094 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
NBPF3Q9H094 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NBPF3Q9H094 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
NBPF3Q9H094 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC23.65■■□□□ 1.38
NBPF3Q9H094 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NBPF3Q9H094 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
NBPF3Q9H094 MAX-217ENST00000557277 728 ntTSL 3 BASIC23.65■■□□□ 1.38
NBPF3Q9H094 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC23.65■■□□□ 1.38
NBPF3Q9H094 Z99916.2-201ENST00000604037 246 ntBASIC23.65■■□□□ 1.38
NBPF3Q9H094 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
NBPF3Q9H094 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NBPF3Q9H094 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
NBPF3Q9H094 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
NBPF3Q9H094 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC23.65■■□□□ 1.38
NBPF3Q9H094 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC23.65■■□□□ 1.38
NBPF3Q9H094 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NBPF3Q9H094 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
NBPF3Q9H094 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.64■■□□□ 1.38
NBPF3Q9H094 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
NBPF3Q9H094 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
NBPF3Q9H094 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC23.64■■□□□ 1.38
NBPF3Q9H094 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
NBPF3Q9H094 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
NBPF3Q9H094 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC23.64■■□□□ 1.38
NBPF3Q9H094 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
NBPF3Q9H094 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NBPF3Q9H094 AL390719.1-204ENST00000412397 1219 ntBASIC23.64■■□□□ 1.37
NBPF3Q9H094 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NBPF3Q9H094 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC23.64■■□□□ 1.37
NBPF3Q9H094 SNORA78-201ENST00000459373 127 ntBASIC23.64■■□□□ 1.37
NBPF3Q9H094 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC23.64■■□□□ 1.37
NBPF3Q9H094 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
NBPF3Q9H094 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC23.64■■□□□ 1.37
NBPF3Q9H094 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC23.64■■□□□ 1.37
NBPF3Q9H094 AC073130.3-201ENST00000624389 2278 ntBASIC23.64■■□□□ 1.37
NBPF3Q9H094 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NBPF3Q9H094 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NBPF3Q9H094 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC23.64■■□□□ 1.37
NBPF3Q9H094 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
NBPF3Q9H094 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
NBPF3Q9H094 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
NBPF3Q9H094 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NBPF3Q9H094 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NBPF3Q9H094 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NBPF3Q9H094 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NBPF3Q9H094 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NBPF3Q9H094 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
NBPF3Q9H094 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NBPF3Q9H094 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
NBPF3Q9H094 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NBPF3Q9H094 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NBPF3Q9H094 HLA-G-202ENST00000376815 851 ntBASIC23.63■■□□□ 1.37
NBPF3Q9H094 HLA-G-203ENST00000376818 1127 ntBASIC23.63■■□□□ 1.37
NBPF3Q9H094 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NBPF3Q9H094 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NBPF3Q9H094 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NBPF3Q9H094 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC23.63■■□□□ 1.37
NBPF3Q9H094 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC23.63■■□□□ 1.37
NBPF3Q9H094 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NBPF3Q9H094 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
NBPF3Q9H094 TCF3P1-201ENST00000423021 1937 ntBASIC23.63■■□□□ 1.37
NBPF3Q9H094 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
NBPF3Q9H094 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NBPF3Q9H094 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC23.62■■□□□ 1.37
NBPF3Q9H094 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC23.62■■□□□ 1.37
NBPF3Q9H094 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
NBPF3Q9H094 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NBPF3Q9H094 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
NBPF3Q9H094 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NBPF3Q9H094 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
NBPF3Q9H094 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC23.62■■□□□ 1.37
NBPF3Q9H094 POM121L13P-201ENST00000422362 380 ntBASIC23.62■■□□□ 1.37
NBPF3Q9H094 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC23.62■■□□□ 1.37
NBPF3Q9H094 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC23.62■■□□□ 1.37
NBPF3Q9H094 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC23.62■■□□□ 1.37
NBPF3Q9H094 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC23.62■■□□□ 1.37
NBPF3Q9H094 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
NBPF3Q9H094 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC23.62■■□□□ 1.37
NBPF3Q9H094 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NBPF3Q9H094 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NBPF3Q9H094 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NBPF3Q9H094 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC23.61■■□□□ 1.37
NBPF3Q9H094 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
NBPF3Q9H094 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms