Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRFN3Q9BTN0 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRFN3Q9BTN0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRFN3Q9BTN0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRFN3Q9BTN0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
LRFN3Q9BTN0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LRFN3Q9BTN0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRFN3Q9BTN0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRFN3Q9BTN0 TSPY19P-201ENST00000418461 509 ntBASIC20■□□□□ 0.79
LRFN3Q9BTN0 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRFN3Q9BTN0 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20■□□□□ 0.79
LRFN3Q9BTN0 TSPY18P-201ENST00000441642 509 ntBASIC20■□□□□ 0.79
LRFN3Q9BTN0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20■□□□□ 0.79
LRFN3Q9BTN0 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20■□□□□ 0.79
LRFN3Q9BTN0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20■□□□□ 0.79
LRFN3Q9BTN0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20■□□□□ 0.79
LRFN3Q9BTN0 AL353719.1-201ENST00000566847 864 ntBASIC20■□□□□ 0.79
LRFN3Q9BTN0 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRFN3Q9BTN0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRFN3Q9BTN0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
LRFN3Q9BTN0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20■□□□□ 0.79
LRFN3Q9BTN0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
LRFN3Q9BTN0 LINC01124-201ENST00000409786 2117 ntBASIC20■□□□□ 0.79
LRFN3Q9BTN0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRFN3Q9BTN0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRFN3Q9BTN0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
LRFN3Q9BTN0 RCC2P6-201ENST00000526625 1557 ntBASIC20■□□□□ 0.79
LRFN3Q9BTN0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRFN3Q9BTN0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
LRFN3Q9BTN0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.99■□□□□ 0.79
LRFN3Q9BTN0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRFN3Q9BTN0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRFN3Q9BTN0 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.99■□□□□ 0.79
LRFN3Q9BTN0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
LRFN3Q9BTN0 STARP1-201ENST00000397973 869 ntBASIC19.99■□□□□ 0.79
LRFN3Q9BTN0 MRPL3P1-201ENST00000400109 1033 ntBASIC19.99■□□□□ 0.79
LRFN3Q9BTN0 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.99■□□□□ 0.79
LRFN3Q9BTN0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRFN3Q9BTN0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.99■□□□□ 0.79
LRFN3Q9BTN0 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.99■□□□□ 0.79
LRFN3Q9BTN0 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.99■□□□□ 0.79
LRFN3Q9BTN0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.99■□□□□ 0.79
LRFN3Q9BTN0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.99■□□□□ 0.79
LRFN3Q9BTN0 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.99■□□□□ 0.79
LRFN3Q9BTN0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRFN3Q9BTN0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.99■□□□□ 0.79
LRFN3Q9BTN0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRFN3Q9BTN0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRFN3Q9BTN0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRFN3Q9BTN0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LRFN3Q9BTN0 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRFN3Q9BTN0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRFN3Q9BTN0 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRFN3Q9BTN0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.98■□□□□ 0.79
LRFN3Q9BTN0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.98■□□□□ 0.79
LRFN3Q9BTN0 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRFN3Q9BTN0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.98■□□□□ 0.79
LRFN3Q9BTN0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
LRFN3Q9BTN0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
LRFN3Q9BTN0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LRFN3Q9BTN0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LRFN3Q9BTN0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRFN3Q9BTN0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRFN3Q9BTN0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.97■□□□□ 0.79
LRFN3Q9BTN0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
LRFN3Q9BTN0 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRFN3Q9BTN0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRFN3Q9BTN0 YBX1P10-201ENST00000444752 975 ntBASIC19.97■□□□□ 0.79
LRFN3Q9BTN0 SPDYE13P-201ENST00000445314 798 ntBASIC19.97■□□□□ 0.79
LRFN3Q9BTN0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.97■□□□□ 0.79
LRFN3Q9BTN0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRFN3Q9BTN0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
LRFN3Q9BTN0 AL139424.1-201ENST00000607572 797 ntBASIC19.97■□□□□ 0.79
LRFN3Q9BTN0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRFN3Q9BTN0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.97■□□□□ 0.79
LRFN3Q9BTN0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.97■□□□□ 0.79
LRFN3Q9BTN0 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRFN3Q9BTN0 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRFN3Q9BTN0 HLA-A-201ENST00000376802 1334 ntBASIC19.97■□□□□ 0.79
LRFN3Q9BTN0 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
LRFN3Q9BTN0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRFN3Q9BTN0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRFN3Q9BTN0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
LRFN3Q9BTN0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.96■□□□□ 0.79
LRFN3Q9BTN0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRFN3Q9BTN0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRFN3Q9BTN0 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.96■□□□□ 0.79
LRFN3Q9BTN0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRFN3Q9BTN0 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRFN3Q9BTN0 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.96■□□□□ 0.79
LRFN3Q9BTN0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
LRFN3Q9BTN0 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRFN3Q9BTN0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.96■□□□□ 0.79
LRFN3Q9BTN0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
LRFN3Q9BTN0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRFN3Q9BTN0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.96■□□□□ 0.79
LRFN3Q9BTN0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRFN3Q9BTN0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LRFN3Q9BTN0 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRFN3Q9BTN0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms