Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK3BQ9BT76 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC13.81□□□□□ -0.2
UPK3BQ9BT76 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK3BQ9BT76 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC13.81□□□□□ -0.2
UPK3BQ9BT76 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC13.81□□□□□ -0.2
UPK3BQ9BT76 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
UPK3BQ9BT76 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK3BQ9BT76 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK3BQ9BT76 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UPK3BQ9BT76 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK3BQ9BT76 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UPK3BQ9BT76 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK3BQ9BT76 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK3BQ9BT76 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK3BQ9BT76 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC13.81□□□□□ -0.2
UPK3BQ9BT76 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK3BQ9BT76 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK3BQ9BT76 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC13.8□□□□□ -0.2
UPK3BQ9BT76 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK3BQ9BT76 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK3BQ9BT76 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UPK3BQ9BT76 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK3BQ9BT76 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK3BQ9BT76 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
UPK3BQ9BT76 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
UPK3BQ9BT76 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK3BQ9BT76 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UPK3BQ9BT76 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UPK3BQ9BT76 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UPK3BQ9BT76 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK3BQ9BT76 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC13.8□□□□□ -0.2
UPK3BQ9BT76 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC13.8□□□□□ -0.2
UPK3BQ9BT76 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC13.8□□□□□ -0.2
UPK3BQ9BT76 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UPK3BQ9BT76 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC13.8□□□□□ -0.2
UPK3BQ9BT76 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UPK3BQ9BT76 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC13.8□□□□□ -0.2
UPK3BQ9BT76 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
UPK3BQ9BT76 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK3BQ9BT76 STK25-205ENST00000405883 1904 ntTSL 2 BASIC13.8□□□□□ -0.2
UPK3BQ9BT76 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK3BQ9BT76 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC13.8□□□□□ -0.2
UPK3BQ9BT76 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK3BQ9BT76 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC13.8□□□□□ -0.2
UPK3BQ9BT76 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC13.8□□□□□ -0.2
UPK3BQ9BT76 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK3BQ9BT76 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK3BQ9BT76 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 AC006128.1-201ENST00000624704 1661 ntBASIC13.79□□□□□ -0.2
UPK3BQ9BT76 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 GCSHP5-201ENST00000443090 522 ntBASIC13.79□□□□□ -0.2
UPK3BQ9BT76 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 MAX-217ENST00000557277 728 ntTSL 3 BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 AC069544.1-201ENST00000609399 999 ntBASIC13.79□□□□□ -0.2
UPK3BQ9BT76 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 PLK5-205ENST00000642079 1969 ntBASIC13.79□□□□□ -0.2
UPK3BQ9BT76 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK3BQ9BT76 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK3BQ9BT76 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK3BQ9BT76 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UPK3BQ9BT76 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK3BQ9BT76 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK3BQ9BT76 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
UPK3BQ9BT76 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
UPK3BQ9BT76 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK3BQ9BT76 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UPK3BQ9BT76 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
UPK3BQ9BT76 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UPK3BQ9BT76 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms