Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VRK1Q99986 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.49■□□□□ 0.39
VRK1Q99986 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VRK1Q99986 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.49■□□□□ 0.39
VRK1Q99986 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
VRK1Q99986 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.49■□□□□ 0.39
VRK1Q99986 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
VRK1Q99986 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
VRK1Q99986 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VRK1Q99986 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
VRK1Q99986 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
VRK1Q99986 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VRK1Q99986 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VRK1Q99986 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VRK1Q99986 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VRK1Q99986 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VRK1Q99986 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VRK1Q99986 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
VRK1Q99986 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
VRK1Q99986 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
VRK1Q99986 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
VRK1Q99986 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VRK1Q99986 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
VRK1Q99986 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VRK1Q99986 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VRK1Q99986 ESRRAP1-201ENST00000400596 1257 ntBASIC17.48■□□□□ 0.39
VRK1Q99986 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.48■□□□□ 0.39
VRK1Q99986 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
VRK1Q99986 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.48■□□□□ 0.39
VRK1Q99986 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
VRK1Q99986 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.48■□□□□ 0.39
VRK1Q99986 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VRK1Q99986 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.48■□□□□ 0.39
VRK1Q99986 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
VRK1Q99986 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VRK1Q99986 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VRK1Q99986 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
VRK1Q99986 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
VRK1Q99986 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VRK1Q99986 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VRK1Q99986 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VRK1Q99986 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VRK1Q99986 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VRK1Q99986 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VRK1Q99986 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
VRK1Q99986 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.47■□□□□ 0.39
VRK1Q99986 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VRK1Q99986 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.47■□□□□ 0.39
VRK1Q99986 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.47■□□□□ 0.39
VRK1Q99986 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
VRK1Q99986 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.47■□□□□ 0.39
VRK1Q99986 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.47■□□□□ 0.39
VRK1Q99986 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.47■□□□□ 0.39
VRK1Q99986 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.47■□□□□ 0.39
VRK1Q99986 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.47■□□□□ 0.39
VRK1Q99986 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VRK1Q99986 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VRK1Q99986 CYP21A1P-202ENST00000354927 1481 ntBASIC17.47■□□□□ 0.39
VRK1Q99986 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VRK1Q99986 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.47■□□□□ 0.39
VRK1Q99986 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VRK1Q99986 AC073314.1-201ENST00000568729 2216 ntBASIC17.47■□□□□ 0.39
VRK1Q99986 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VRK1Q99986 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
VRK1Q99986 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.47■□□□□ 0.39
VRK1Q99986 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
VRK1Q99986 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
VRK1Q99986 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VRK1Q99986 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
VRK1Q99986 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VRK1Q99986 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VRK1Q99986 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VRK1Q99986 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
VRK1Q99986 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
VRK1Q99986 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
VRK1Q99986 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.46■□□□□ 0.39
VRK1Q99986 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VRK1Q99986 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VRK1Q99986 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
VRK1Q99986 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.46■□□□□ 0.39
VRK1Q99986 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.46■□□□□ 0.39
VRK1Q99986 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.46■□□□□ 0.39
VRK1Q99986 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VRK1Q99986 ITM2C-210ENST00000620962 501 ntBASIC17.46■□□□□ 0.39
VRK1Q99986 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.46■□□□□ 0.39
VRK1Q99986 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
VRK1Q99986 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VRK1Q99986 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VRK1Q99986 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
VRK1Q99986 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.46■□□□□ 0.38
VRK1Q99986 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VRK1Q99986 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VRK1Q99986 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VRK1Q99986 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
VRK1Q99986 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
VRK1Q99986 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
VRK1Q99986 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VRK1Q99986 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VRK1Q99986 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VRK1Q99986 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms