Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPAS2Q99743 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
NPAS2Q99743 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPAS2Q99743 AL691432.2-201ENST00000607222 2038 ntBASIC19.42■□□□□ 0.7
NPAS2Q99743 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.42■□□□□ 0.7
NPAS2Q99743 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.42■□□□□ 0.7
NPAS2Q99743 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPAS2Q99743 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.42■□□□□ 0.7
NPAS2Q99743 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.42■□□□□ 0.7
NPAS2Q99743 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NPAS2Q99743 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPAS2Q99743 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.41■□□□□ 0.7
NPAS2Q99743 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPAS2Q99743 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPAS2Q99743 TNXA-203ENST00000507684 2038 ntBASIC19.41■□□□□ 0.7
NPAS2Q99743 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NPAS2Q99743 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPAS2Q99743 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
NPAS2Q99743 AC007322.4-201ENST00000509611 723 ntBASIC19.41■□□□□ 0.7
NPAS2Q99743 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.41■□□□□ 0.7
NPAS2Q99743 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NPAS2Q99743 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPAS2Q99743 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPAS2Q99743 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.41■□□□□ 0.7
NPAS2Q99743 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.41■□□□□ 0.7
NPAS2Q99743 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPAS2Q99743 KRT16P2-201ENST00000414673 1423 ntBASIC19.41■□□□□ 0.7
NPAS2Q99743 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NPAS2Q99743 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPAS2Q99743 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPAS2Q99743 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPAS2Q99743 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.41■□□□□ 0.7
NPAS2Q99743 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.41■□□□□ 0.7
NPAS2Q99743 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS2Q99743 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.4■□□□□ 0.7
NPAS2Q99743 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS2Q99743 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.4■□□□□ 0.7
NPAS2Q99743 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.4■□□□□ 0.7
NPAS2Q99743 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS2Q99743 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS2Q99743 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS2Q99743 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.4■□□□□ 0.7
NPAS2Q99743 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.4■□□□□ 0.7
NPAS2Q99743 AC120498.10-201ENST00000621827 505 ntBASIC19.4■□□□□ 0.7
NPAS2Q99743 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NPAS2Q99743 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.4■□□□□ 0.7
NPAS2Q99743 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS2Q99743 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS2Q99743 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS2Q99743 AC005332.7-201ENST00000614046 2005 ntBASIC19.4■□□□□ 0.7
NPAS2Q99743 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
NPAS2Q99743 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.4■□□□□ 0.7
NPAS2Q99743 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS2Q99743 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
NPAS2Q99743 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS2Q99743 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS2Q99743 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.7
NPAS2Q99743 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
NPAS2Q99743 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
NPAS2Q99743 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
NPAS2Q99743 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.39■□□□□ 0.69
NPAS2Q99743 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NPAS2Q99743 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NPAS2Q99743 CYP2T1P-201ENST00000432607 1285 ntBASIC19.39■□□□□ 0.69
NPAS2Q99743 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.39■□□□□ 0.69
NPAS2Q99743 AC142086.2-201ENST00000569753 217 ntBASIC19.39■□□□□ 0.69
NPAS2Q99743 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NPAS2Q99743 RBM17P2-201ENST00000616397 1405 ntBASIC19.39■□□□□ 0.69
NPAS2Q99743 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NPAS2Q99743 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
NPAS2Q99743 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
NPAS2Q99743 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPAS2Q99743 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NPAS2Q99743 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.39■□□□□ 0.69
NPAS2Q99743 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPAS2Q99743 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
NPAS2Q99743 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPAS2Q99743 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
NPAS2Q99743 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
NPAS2Q99743 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPAS2Q99743 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPAS2Q99743 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPAS2Q99743 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPAS2Q99743 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NPAS2Q99743 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.38■□□□□ 0.69
NPAS2Q99743 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.38■□□□□ 0.69
NPAS2Q99743 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
NPAS2Q99743 AC133552.2-202ENST00000575694 574 ntBASIC19.38■□□□□ 0.69
NPAS2Q99743 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.38■□□□□ 0.69
NPAS2Q99743 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
NPAS2Q99743 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
NPAS2Q99743 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.38■□□□□ 0.69
NPAS2Q99743 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPAS2Q99743 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPAS2Q99743 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
NPAS2Q99743 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.37■□□□□ 0.69
NPAS2Q99743 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.37■□□□□ 0.69
NPAS2Q99743 DPP3P2-201ENST00000416030 1696 ntBASIC19.37■□□□□ 0.69
NPAS2Q99743 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPAS2Q99743 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms