Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL13Q99616 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCL13Q99616 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCL13Q99616 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCL13Q99616 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.66■□□□□ 0.26
CCL13Q99616 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.66■□□□□ 0.26
CCL13Q99616 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.66■□□□□ 0.26
CCL13Q99616 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.66■□□□□ 0.26
CCL13Q99616 UNC93B4-201ENST00000505679 747 ntBASIC16.66■□□□□ 0.26
CCL13Q99616 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.66■□□□□ 0.26
CCL13Q99616 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.66■□□□□ 0.26
CCL13Q99616 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCL13Q99616 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.66■□□□□ 0.26
CCL13Q99616 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.66■□□□□ 0.26
CCL13Q99616 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.66■□□□□ 0.26
CCL13Q99616 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.66■□□□□ 0.26
CCL13Q99616 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.66■□□□□ 0.26
CCL13Q99616 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CCL13Q99616 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL13Q99616 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.66■□□□□ 0.26
CCL13Q99616 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCL13Q99616 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CCL13Q99616 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL13Q99616 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL13Q99616 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCL13Q99616 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL13Q99616 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL13Q99616 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL13Q99616 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL13Q99616 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CCL13Q99616 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL13Q99616 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCL13Q99616 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL13Q99616 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL13Q99616 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCL13Q99616 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CCL13Q99616 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL13Q99616 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.65■□□□□ 0.26
CCL13Q99616 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCL13Q99616 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL13Q99616 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CCL13Q99616 MIR4651-201ENST00000582622 73 ntBASIC16.65■□□□□ 0.26
CCL13Q99616 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.65■□□□□ 0.26
CCL13Q99616 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.65■□□□□ 0.26
CCL13Q99616 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL13Q99616 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CCL13Q99616 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCL13Q99616 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL13Q99616 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCL13Q99616 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL13Q99616 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL13Q99616 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL13Q99616 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CCL13Q99616 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL13Q99616 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCL13Q99616 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CCL13Q99616 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CCL13Q99616 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL13Q99616 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL13Q99616 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CCL13Q99616 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.64■□□□□ 0.25
CCL13Q99616 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL13Q99616 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL13Q99616 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCL13Q99616 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCL13Q99616 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCL13Q99616 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.64■□□□□ 0.25
CCL13Q99616 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CCL13Q99616 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.64■□□□□ 0.25
CCL13Q99616 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.64■□□□□ 0.25
CCL13Q99616 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CCL13Q99616 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.64■□□□□ 0.25
CCL13Q99616 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.64■□□□□ 0.25
CCL13Q99616 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CCL13Q99616 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL13Q99616 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCL13Q99616 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL13Q99616 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL13Q99616 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.64■□□□□ 0.25
CCL13Q99616 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL13Q99616 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL13Q99616 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL13Q99616 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.64■□□□□ 0.25
CCL13Q99616 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.64■□□□□ 0.25
CCL13Q99616 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL13Q99616 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL13Q99616 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCL13Q99616 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCL13Q99616 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL13Q99616 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL13Q99616 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.63■□□□□ 0.25
CCL13Q99616 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCL13Q99616 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL13Q99616 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL13Q99616 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCL13Q99616 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL13Q99616 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL13Q99616 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCL13Q99616 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL13Q99616 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms