Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB18PQ96TA0 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB18PQ96TA0 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB18PQ96TA0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDHB18PQ96TA0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
PCDHB18PQ96TA0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.11■□□□□ 0.97
PCDHB18PQ96TA0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.11■□□□□ 0.97
PCDHB18PQ96TA0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PCDHB18PQ96TA0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDHB18PQ96TA0 AC092666.2-201ENST00000613287 246 ntBASIC21.11■□□□□ 0.97
PCDHB18PQ96TA0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDHB18PQ96TA0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB18PQ96TA0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB18PQ96TA0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB18PQ96TA0 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB18PQ96TA0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB18PQ96TA0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB18PQ96TA0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PCDHB18PQ96TA0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB18PQ96TA0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB18PQ96TA0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
PCDHB18PQ96TA0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB18PQ96TA0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB18PQ96TA0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHB18PQ96TA0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB18PQ96TA0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.1■□□□□ 0.97
PCDHB18PQ96TA0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB18PQ96TA0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB18PQ96TA0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PCDHB18PQ96TA0 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB18PQ96TA0 TSPY6P-201ENST00000448518 926 ntBASIC21.1■□□□□ 0.97
PCDHB18PQ96TA0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHB18PQ96TA0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.1■□□□□ 0.97
PCDHB18PQ96TA0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB18PQ96TA0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
PCDHB18PQ96TA0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PCDHB18PQ96TA0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHB18PQ96TA0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB18PQ96TA0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB18PQ96TA0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
PCDHB18PQ96TA0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB18PQ96TA0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDHB18PQ96TA0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PCDHB18PQ96TA0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDHB18PQ96TA0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDHB18PQ96TA0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB18PQ96TA0 DUSP5P2-201ENST00000426873 1033 ntBASIC21.09■□□□□ 0.97
PCDHB18PQ96TA0 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHB18PQ96TA0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDHB18PQ96TA0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDHB18PQ96TA0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDHB18PQ96TA0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PCDHB18PQ96TA0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB18PQ96TA0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHB18PQ96TA0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB18PQ96TA0 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB18PQ96TA0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB18PQ96TA0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB18PQ96TA0 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB18PQ96TA0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHB18PQ96TA0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB18PQ96TA0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB18PQ96TA0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHB18PQ96TA0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB18PQ96TA0 AC092118.2-201ENST00000613495 667 ntBASIC21.08■□□□□ 0.97
PCDHB18PQ96TA0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
PCDHB18PQ96TA0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHB18PQ96TA0 PHGDH-210ENST00000641115 1638 ntBASIC21.07■□□□□ 0.96
PCDHB18PQ96TA0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
PCDHB18PQ96TA0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB18PQ96TA0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB18PQ96TA0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB18PQ96TA0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDHB18PQ96TA0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDHB18PQ96TA0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PCDHB18PQ96TA0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDHB18PQ96TA0 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.07■□□□□ 0.96
PCDHB18PQ96TA0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB18PQ96TA0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.07■□□□□ 0.96
PCDHB18PQ96TA0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDHB18PQ96TA0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDHB18PQ96TA0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
PCDHB18PQ96TA0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.07■□□□□ 0.96
PCDHB18PQ96TA0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PCDHB18PQ96TA0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.07■□□□□ 0.96
PCDHB18PQ96TA0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB18PQ96TA0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB18PQ96TA0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDHB18PQ96TA0 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB18PQ96TA0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDHB18PQ96TA0 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDHB18PQ96TA0 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDHB18PQ96TA0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB18PQ96TA0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB18PQ96TA0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB18PQ96TA0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.06■□□□□ 0.96
PCDHB18PQ96TA0 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
PCDHB18PQ96TA0 AC091874.3-201ENST00000512672 1195 ntBASIC21.06■□□□□ 0.96
PCDHB18PQ96TA0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDHB18PQ96TA0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms