Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC33.26■■■□□ 2.92
IFT140Q96RY7 VENTXP5-201ENST00000523979 775 ntBASIC33.26■■■□□ 2.92
IFT140Q96RY7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC33.26■■■□□ 2.92
IFT140Q96RY7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC33.26■■■□□ 2.92
IFT140Q96RY7 AL031432.5-201ENST00000641059 760 ntBASIC33.26■■■□□ 2.92
IFT140Q96RY7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC33.26■■■□□ 2.92
IFT140Q96RY7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC33.26■■■□□ 2.92
IFT140Q96RY7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC33.26■■■□□ 2.92
IFT140Q96RY7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC33.26■■■□□ 2.91
IFT140Q96RY7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC33.26■■■□□ 2.91
IFT140Q96RY7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC33.25■■■□□ 2.91
IFT140Q96RY7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC33.25■■■□□ 2.91
IFT140Q96RY7 AC004951.3-201ENST00000418645 1148 ntBASIC33.25■■■□□ 2.91
IFT140Q96RY7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
IFT140Q96RY7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC33.25■■■□□ 2.91
IFT140Q96RY7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
IFT140Q96RY7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
IFT140Q96RY7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
IFT140Q96RY7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
IFT140Q96RY7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC33.25■■■□□ 2.91
IFT140Q96RY7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
IFT140Q96RY7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
IFT140Q96RY7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC33.25■■■□□ 2.91
IFT140Q96RY7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC33.25■■■□□ 2.91
IFT140Q96RY7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC33.24■■■□□ 2.91
IFT140Q96RY7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
IFT140Q96RY7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
IFT140Q96RY7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
IFT140Q96RY7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC33.24■■■□□ 2.91
IFT140Q96RY7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
IFT140Q96RY7 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC33.24■■■□□ 2.91
IFT140Q96RY7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC33.24■■■□□ 2.91
IFT140Q96RY7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
IFT140Q96RY7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
IFT140Q96RY7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
IFT140Q96RY7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC33.24■■■□□ 2.91
IFT140Q96RY7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
IFT140Q96RY7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC33.24■■■□□ 2.91
IFT140Q96RY7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
IFT140Q96RY7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC33.23■■■□□ 2.91
IFT140Q96RY7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC33.23■■■□□ 2.91
IFT140Q96RY7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC33.23■■■□□ 2.91
IFT140Q96RY7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC33.23■■■□□ 2.91
IFT140Q96RY7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC33.23■■■□□ 2.91
IFT140Q96RY7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC33.23■■■□□ 2.91
IFT140Q96RY7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
IFT140Q96RY7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC33.23■■■□□ 2.91
IFT140Q96RY7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
IFT140Q96RY7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC33.23■■■□□ 2.91
IFT140Q96RY7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
IFT140Q96RY7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
IFT140Q96RY7 AC023511.2-201ENST00000618803 211 ntBASIC33.23■■■□□ 2.91
IFT140Q96RY7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC33.23■■■□□ 2.91
IFT140Q96RY7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
IFT140Q96RY7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
IFT140Q96RY7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC33.22■■■□□ 2.91
IFT140Q96RY7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC33.22■■■□□ 2.91
IFT140Q96RY7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC33.22■■■□□ 2.91
IFT140Q96RY7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC33.22■■■□□ 2.91
IFT140Q96RY7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC33.22■■■□□ 2.91
IFT140Q96RY7 AL512604.3-201ENST00000569583 964 ntBASIC33.22■■■□□ 2.91
IFT140Q96RY7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC33.22■■■□□ 2.91
IFT140Q96RY7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC33.22■■■□□ 2.91
IFT140Q96RY7 GOLGA2P6-201ENST00000340929 2049 ntBASIC33.22■■■□□ 2.91
IFT140Q96RY7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC33.22■■■□□ 2.91
IFT140Q96RY7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC33.21■■■□□ 2.91
IFT140Q96RY7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
IFT140Q96RY7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC33.21■■■□□ 2.91
IFT140Q96RY7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC33.21■■■□□ 2.91
IFT140Q96RY7 PRSS44-201ENST00000515154 1146 ntBASIC33.21■■■□□ 2.91
IFT140Q96RY7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC33.21■■■□□ 2.91
IFT140Q96RY7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC33.21■■■□□ 2.91
IFT140Q96RY7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
IFT140Q96RY7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC33.2■■■□□ 2.91
IFT140Q96RY7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
IFT140Q96RY7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
IFT140Q96RY7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC33.2■■■□□ 2.91
IFT140Q96RY7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC33.2■■■□□ 2.91
IFT140Q96RY7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC33.2■■■□□ 2.91
IFT140Q96RY7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC33.2■■■□□ 2.91
IFT140Q96RY7 NPAP1P7-201ENST00000613027 823 ntBASIC33.2■■■□□ 2.91
IFT140Q96RY7 HLA-A-209ENST00000638375 975 ntBASIC33.2■■■□□ 2.91
IFT140Q96RY7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
IFT140Q96RY7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
IFT140Q96RY7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC33.2■■■□□ 2.9
IFT140Q96RY7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
IFT140Q96RY7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC33.19■■■□□ 2.9
IFT140Q96RY7 TSPY17P-201ENST00000450329 467 ntBASIC33.19■■■□□ 2.9
IFT140Q96RY7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC33.19■■■□□ 2.9
IFT140Q96RY7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC33.19■■■□□ 2.9
IFT140Q96RY7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC33.19■■■□□ 2.9
IFT140Q96RY7 AC116351.2-201ENST00000606540 1585 ntBASIC33.19■■■□□ 2.9
IFT140Q96RY7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
IFT140Q96RY7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
IFT140Q96RY7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
IFT140Q96RY7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
IFT140Q96RY7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC33.18■■■□□ 2.9
IFT140Q96RY7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC33.18■■■□□ 2.9
IFT140Q96RY7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC33.18■■■□□ 2.9
IFT140Q96RY7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC33.18■■■□□ 2.9
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms