Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CSPG4P5Q96PW8 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CSPG4P5Q96PW8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CSPG4P5Q96PW8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSPG4P5Q96PW8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.52■□□□□ 0.88
CSPG4P5Q96PW8 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSPG4P5Q96PW8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.52■□□□□ 0.88
CSPG4P5Q96PW8 ID1-201ENST00000376105 1233 ntBASIC20.52■□□□□ 0.88
CSPG4P5Q96PW8 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.52■□□□□ 0.88
CSPG4P5Q96PW8 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.52■□□□□ 0.88
CSPG4P5Q96PW8 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.52■□□□□ 0.88
CSPG4P5Q96PW8 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CSPG4P5Q96PW8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.52■□□□□ 0.88
CSPG4P5Q96PW8 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.52■□□□□ 0.88
CSPG4P5Q96PW8 PHGDH-210ENST00000641115 1638 ntBASIC20.52■□□□□ 0.88
CSPG4P5Q96PW8 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
CSPG4P5Q96PW8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
CSPG4P5Q96PW8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.52■□□□□ 0.87
CSPG4P5Q96PW8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.52■□□□□ 0.87
CSPG4P5Q96PW8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CSPG4P5Q96PW8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CSPG4P5Q96PW8 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
CSPG4P5Q96PW8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.52■□□□□ 0.87
CSPG4P5Q96PW8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CSPG4P5Q96PW8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSPG4P5Q96PW8 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSPG4P5Q96PW8 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSPG4P5Q96PW8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSPG4P5Q96PW8 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSPG4P5Q96PW8 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSPG4P5Q96PW8 AL390719.1-204ENST00000412397 1219 ntBASIC20.51■□□□□ 0.87
CSPG4P5Q96PW8 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.51■□□□□ 0.87
CSPG4P5Q96PW8 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSPG4P5Q96PW8 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.51■□□□□ 0.87
CSPG4P5Q96PW8 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CSPG4P5Q96PW8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSPG4P5Q96PW8 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSPG4P5Q96PW8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSPG4P5Q96PW8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CSPG4P5Q96PW8 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSPG4P5Q96PW8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSPG4P5Q96PW8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CSPG4P5Q96PW8 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.51■□□□□ 0.87
CSPG4P5Q96PW8 AC092368.3-202ENST00000574180 1591 ntBASIC20.51■□□□□ 0.87
CSPG4P5Q96PW8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CSPG4P5Q96PW8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSPG4P5Q96PW8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.5■□□□□ 0.87
CSPG4P5Q96PW8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSPG4P5Q96PW8 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
CSPG4P5Q96PW8 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSPG4P5Q96PW8 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.5■□□□□ 0.87
CSPG4P5Q96PW8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CSPG4P5Q96PW8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.5■□□□□ 0.87
CSPG4P5Q96PW8 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.5■□□□□ 0.87
CSPG4P5Q96PW8 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSPG4P5Q96PW8 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
CSPG4P5Q96PW8 AC006557.6-201ENST00000623071 864 ntBASIC20.5■□□□□ 0.87
CSPG4P5Q96PW8 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CSPG4P5Q96PW8 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSPG4P5Q96PW8 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.5■□□□□ 0.87
CSPG4P5Q96PW8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.5■□□□□ 0.87
CSPG4P5Q96PW8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CSPG4P5Q96PW8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.5■□□□□ 0.87
CSPG4P5Q96PW8 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.5■□□□□ 0.87
CSPG4P5Q96PW8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSPG4P5Q96PW8 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.5■□□□□ 0.87
CSPG4P5Q96PW8 AP001271.2-201ENST00000624018 1556 ntBASIC20.5■□□□□ 0.87
CSPG4P5Q96PW8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSPG4P5Q96PW8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CSPG4P5Q96PW8 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.49■□□□□ 0.87
CSPG4P5Q96PW8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.49■□□□□ 0.87
CSPG4P5Q96PW8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSPG4P5Q96PW8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CSPG4P5Q96PW8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSPG4P5Q96PW8 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CSPG4P5Q96PW8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CSPG4P5Q96PW8 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSPG4P5Q96PW8 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSPG4P5Q96PW8 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSPG4P5Q96PW8 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.49■□□□□ 0.87
CSPG4P5Q96PW8 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSPG4P5Q96PW8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CSPG4P5Q96PW8 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.49■□□□□ 0.87
CSPG4P5Q96PW8 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CSPG4P5Q96PW8 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.49■□□□□ 0.87
CSPG4P5Q96PW8 AC060766.5-201ENST00000590539 871 ntBASIC20.49■□□□□ 0.87
CSPG4P5Q96PW8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSPG4P5Q96PW8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSPG4P5Q96PW8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.49■□□□□ 0.87
CSPG4P5Q96PW8 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.49■□□□□ 0.87
CSPG4P5Q96PW8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSPG4P5Q96PW8 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSPG4P5Q96PW8 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CSPG4P5Q96PW8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CSPG4P5Q96PW8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSPG4P5Q96PW8 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSPG4P5Q96PW8 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSPG4P5Q96PW8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.48■□□□□ 0.87
CSPG4P5Q96PW8 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CSPG4P5Q96PW8 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms