Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GAFA1Q96PS6 AC124283.5-201ENST00000624661 1809 ntBASIC16.57■□□□□ 0.24
GAFA1Q96PS6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
GAFA1Q96PS6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
GAFA1Q96PS6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.57■□□□□ 0.24
GAFA1Q96PS6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
GAFA1Q96PS6 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GAFA1Q96PS6 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.57■□□□□ 0.24
GAFA1Q96PS6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
GAFA1Q96PS6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
GAFA1Q96PS6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GAFA1Q96PS6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
GAFA1Q96PS6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
GAFA1Q96PS6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.57■□□□□ 0.24
GAFA1Q96PS6 RPS2P52-201ENST00000469610 820 ntBASIC16.57■□□□□ 0.24
GAFA1Q96PS6 AP003097.1-201ENST00000530657 1135 ntBASIC16.57■□□□□ 0.24
GAFA1Q96PS6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.57■□□□□ 0.24
GAFA1Q96PS6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.57■□□□□ 0.24
GAFA1Q96PS6 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.57■□□□□ 0.24
GAFA1Q96PS6 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GAFA1Q96PS6 AC120498.8-201ENST00000614275 531 ntBASIC16.57■□□□□ 0.24
GAFA1Q96PS6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
GAFA1Q96PS6 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GAFA1Q96PS6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
GAFA1Q96PS6 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
GAFA1Q96PS6 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
GAFA1Q96PS6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GAFA1Q96PS6 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GAFA1Q96PS6 PHGDH-210ENST00000641115 1638 ntBASIC16.56■□□□□ 0.24
GAFA1Q96PS6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GAFA1Q96PS6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GAFA1Q96PS6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.56■□□□□ 0.24
GAFA1Q96PS6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GAFA1Q96PS6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.56■□□□□ 0.24
GAFA1Q96PS6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.56■□□□□ 0.24
GAFA1Q96PS6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GAFA1Q96PS6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
GAFA1Q96PS6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GAFA1Q96PS6 AC008403.3-201ENST00000598924 454 ntBASIC16.56■□□□□ 0.24
GAFA1Q96PS6 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.56■□□□□ 0.24
GAFA1Q96PS6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.56■□□□□ 0.24
GAFA1Q96PS6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GAFA1Q96PS6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
GAFA1Q96PS6 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
GAFA1Q96PS6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GAFA1Q96PS6 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.56■□□□□ 0.24
GAFA1Q96PS6 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GAFA1Q96PS6 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GAFA1Q96PS6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
GAFA1Q96PS6 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.56■□□□□ 0.24
GAFA1Q96PS6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GAFA1Q96PS6 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GAFA1Q96PS6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GAFA1Q96PS6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GAFA1Q96PS6 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GAFA1Q96PS6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
GAFA1Q96PS6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
GAFA1Q96PS6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
GAFA1Q96PS6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.55■□□□□ 0.24
GAFA1Q96PS6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.55■□□□□ 0.24
GAFA1Q96PS6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
GAFA1Q96PS6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.55■□□□□ 0.24
GAFA1Q96PS6 AC026366.1-201ENST00000488803 879 ntBASIC16.55■□□□□ 0.24
GAFA1Q96PS6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.55■□□□□ 0.24
GAFA1Q96PS6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.55■□□□□ 0.24
GAFA1Q96PS6 MIR4651-201ENST00000582622 73 ntBASIC16.55■□□□□ 0.24
GAFA1Q96PS6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GAFA1Q96PS6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.55■□□□□ 0.24
GAFA1Q96PS6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.55■□□□□ 0.24
GAFA1Q96PS6 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
GAFA1Q96PS6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GAFA1Q96PS6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.55■□□□□ 0.24
GAFA1Q96PS6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.55■□□□□ 0.24
GAFA1Q96PS6 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.55■□□□□ 0.24
GAFA1Q96PS6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.55■□□□□ 0.24
GAFA1Q96PS6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
GAFA1Q96PS6 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GAFA1Q96PS6 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GAFA1Q96PS6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
GAFA1Q96PS6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
GAFA1Q96PS6 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GAFA1Q96PS6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GAFA1Q96PS6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.54■□□□□ 0.24
GAFA1Q96PS6 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.54■□□□□ 0.24
GAFA1Q96PS6 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GAFA1Q96PS6 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GAFA1Q96PS6 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.54■□□□□ 0.24
GAFA1Q96PS6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GAFA1Q96PS6 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
GAFA1Q96PS6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.54■□□□□ 0.24
GAFA1Q96PS6 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
GAFA1Q96PS6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GAFA1Q96PS6 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.54■□□□□ 0.24
GAFA1Q96PS6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GAFA1Q96PS6 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
GAFA1Q96PS6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GAFA1Q96PS6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.53■□□□□ 0.24
GAFA1Q96PS6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GAFA1Q96PS6 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.53■□□□□ 0.24
GAFA1Q96PS6 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms