Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCPIP1Q96JH7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCPIP1Q96JH7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
VCPIP1Q96JH7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.96■□□□□ 0.95
VCPIP1Q96JH7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
VCPIP1Q96JH7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.96■□□□□ 0.95
VCPIP1Q96JH7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCPIP1Q96JH7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
VCPIP1Q96JH7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.95
VCPIP1Q96JH7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
VCPIP1Q96JH7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VCPIP1Q96JH7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.95■□□□□ 0.94
VCPIP1Q96JH7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.95■□□□□ 0.94
VCPIP1Q96JH7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.95■□□□□ 0.94
VCPIP1Q96JH7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.95■□□□□ 0.94
VCPIP1Q96JH7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
VCPIP1Q96JH7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
VCPIP1Q96JH7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VCPIP1Q96JH7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.95■□□□□ 0.94
VCPIP1Q96JH7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VCPIP1Q96JH7 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.95■□□□□ 0.94
VCPIP1Q96JH7 TSPY6P-201ENST00000448518 926 ntBASIC20.95■□□□□ 0.94
VCPIP1Q96JH7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.95■□□□□ 0.94
VCPIP1Q96JH7 AL109923.1-201ENST00000618799 583 ntBASIC20.95■□□□□ 0.94
VCPIP1Q96JH7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.95■□□□□ 0.94
VCPIP1Q96JH7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VCPIP1Q96JH7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.95■□□□□ 0.94
VCPIP1Q96JH7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
VCPIP1Q96JH7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VCPIP1Q96JH7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VCPIP1Q96JH7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VCPIP1Q96JH7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
VCPIP1Q96JH7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VCPIP1Q96JH7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.94■□□□□ 0.94
VCPIP1Q96JH7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VCPIP1Q96JH7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VCPIP1Q96JH7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VCPIP1Q96JH7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.94■□□□□ 0.94
VCPIP1Q96JH7 AL158211.5-201ENST00000623583 2518 ntBASIC20.94■□□□□ 0.94
VCPIP1Q96JH7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
VCPIP1Q96JH7 SLC29A4P1-201ENST00000398760 971 ntBASIC20.94■□□□□ 0.94
VCPIP1Q96JH7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.94■□□□□ 0.94
VCPIP1Q96JH7 DUSP5P2-201ENST00000426873 1033 ntBASIC20.94■□□□□ 0.94
VCPIP1Q96JH7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.94■□□□□ 0.94
VCPIP1Q96JH7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VCPIP1Q96JH7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.94■□□□□ 0.94
VCPIP1Q96JH7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
VCPIP1Q96JH7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VCPIP1Q96JH7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.94■□□□□ 0.94
VCPIP1Q96JH7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
VCPIP1Q96JH7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VCPIP1Q96JH7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
VCPIP1Q96JH7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
VCPIP1Q96JH7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.94■□□□□ 0.94
VCPIP1Q96JH7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
VCPIP1Q96JH7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VCPIP1Q96JH7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
VCPIP1Q96JH7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
VCPIP1Q96JH7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.93■□□□□ 0.94
VCPIP1Q96JH7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VCPIP1Q96JH7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
VCPIP1Q96JH7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.93■□□□□ 0.94
VCPIP1Q96JH7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VCPIP1Q96JH7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.93■□□□□ 0.94
VCPIP1Q96JH7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.93■□□□□ 0.94
VCPIP1Q96JH7 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.93■□□□□ 0.94
VCPIP1Q96JH7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.93■□□□□ 0.94
VCPIP1Q96JH7 AC091874.3-201ENST00000512672 1195 ntBASIC20.93■□□□□ 0.94
VCPIP1Q96JH7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.93■□□□□ 0.94
VCPIP1Q96JH7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.93■□□□□ 0.94
VCPIP1Q96JH7 AC005829.2-201ENST00000571422 1056 ntBASIC20.93■□□□□ 0.94
VCPIP1Q96JH7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
VCPIP1Q96JH7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.93■□□□□ 0.94
VCPIP1Q96JH7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
VCPIP1Q96JH7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VCPIP1Q96JH7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.93■□□□□ 0.94
VCPIP1Q96JH7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
VCPIP1Q96JH7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.93■□□□□ 0.94
VCPIP1Q96JH7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VCPIP1Q96JH7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VCPIP1Q96JH7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.92■□□□□ 0.94
VCPIP1Q96JH7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.92■□□□□ 0.94
VCPIP1Q96JH7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VCPIP1Q96JH7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
VCPIP1Q96JH7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
VCPIP1Q96JH7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VCPIP1Q96JH7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
VCPIP1Q96JH7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VCPIP1Q96JH7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VCPIP1Q96JH7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.92■□□□□ 0.94
VCPIP1Q96JH7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
VCPIP1Q96JH7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
VCPIP1Q96JH7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.92■□□□□ 0.94
VCPIP1Q96JH7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.92■□□□□ 0.94
VCPIP1Q96JH7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.92■□□□□ 0.94
VCPIP1Q96JH7 MIR4758-201ENST00000577688 71 ntBASIC20.92■□□□□ 0.94
VCPIP1Q96JH7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VCPIP1Q96JH7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.92■□□□□ 0.94
VCPIP1Q96JH7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VCPIP1Q96JH7 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms