Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.71■□□□□ 0.27
RTN4IP1Q8WWV3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.71■□□□□ 0.27
RTN4IP1Q8WWV3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTN4IP1Q8WWV3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
RTN4IP1Q8WWV3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
RTN4IP1Q8WWV3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
RTN4IP1Q8WWV3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.7■□□□□ 0.26
RTN4IP1Q8WWV3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTN4IP1Q8WWV3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.7■□□□□ 0.26
RTN4IP1Q8WWV3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTN4IP1Q8WWV3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTN4IP1Q8WWV3 AL691432.2-201ENST00000607222 2038 ntBASIC16.7■□□□□ 0.26
RTN4IP1Q8WWV3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.7■□□□□ 0.26
RTN4IP1Q8WWV3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.7■□□□□ 0.26
RTN4IP1Q8WWV3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTN4IP1Q8WWV3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTN4IP1Q8WWV3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
RTN4IP1Q8WWV3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTN4IP1Q8WWV3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RTN4IP1Q8WWV3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RTN4IP1Q8WWV3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RTN4IP1Q8WWV3 TERF1P5-201ENST00000477545 1207 ntBASIC16.7■□□□□ 0.26
RTN4IP1Q8WWV3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.7■□□□□ 0.26
RTN4IP1Q8WWV3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
RTN4IP1Q8WWV3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RTN4IP1Q8WWV3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.7■□□□□ 0.26
RTN4IP1Q8WWV3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.7■□□□□ 0.26
RTN4IP1Q8WWV3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTN4IP1Q8WWV3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.7■□□□□ 0.26
RTN4IP1Q8WWV3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
RTN4IP1Q8WWV3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.7■□□□□ 0.26
RTN4IP1Q8WWV3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.69■□□□□ 0.26
RTN4IP1Q8WWV3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RTN4IP1Q8WWV3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTN4IP1Q8WWV3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTN4IP1Q8WWV3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTN4IP1Q8WWV3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTN4IP1Q8WWV3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.69■□□□□ 0.26
RTN4IP1Q8WWV3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RTN4IP1Q8WWV3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTN4IP1Q8WWV3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTN4IP1Q8WWV3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTN4IP1Q8WWV3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.69■□□□□ 0.26
RTN4IP1Q8WWV3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RTN4IP1Q8WWV3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RTN4IP1Q8WWV3 MFSD11-216ENST00000590393 1141 ntBASIC16.69■□□□□ 0.26
RTN4IP1Q8WWV3 AC022517.1-201ENST00000592429 346 ntBASIC16.69■□□□□ 0.26
RTN4IP1Q8WWV3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTN4IP1Q8WWV3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
RTN4IP1Q8WWV3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTN4IP1Q8WWV3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RTN4IP1Q8WWV3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RTN4IP1Q8WWV3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTN4IP1Q8WWV3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTN4IP1Q8WWV3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTN4IP1Q8WWV3 DPP3P2-201ENST00000416030 1696 ntBASIC16.69■□□□□ 0.26
RTN4IP1Q8WWV3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTN4IP1Q8WWV3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 AC007322.3-201ENST00000426526 701 ntBASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 AC013268.1-206ENST00000638368 961 ntBASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 AC112229.1-201ENST00000639295 961 ntBASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 AC004408.2-201ENST00000623613 2777 ntBASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RTN4IP1Q8WWV3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTN4IP1Q8WWV3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RTN4IP1Q8WWV3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTN4IP1Q8WWV3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.67■□□□□ 0.26
RTN4IP1Q8WWV3 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.67■□□□□ 0.26
RTN4IP1Q8WWV3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RTN4IP1Q8WWV3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms