Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TTC16Q8NEE8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TTC16Q8NEE8 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TTC16Q8NEE8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.87■□□□□ 0.93
TTC16Q8NEE8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TTC16Q8NEE8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TTC16Q8NEE8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TTC16Q8NEE8 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TTC16Q8NEE8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TTC16Q8NEE8 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.87■□□□□ 0.93
TTC16Q8NEE8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TTC16Q8NEE8 TSPY7P-201ENST00000431358 1114 ntBASIC20.87■□□□□ 0.93
TTC16Q8NEE8 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TTC16Q8NEE8 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.87■□□□□ 0.93
TTC16Q8NEE8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TTC16Q8NEE8 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TTC16Q8NEE8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.87■□□□□ 0.93
TTC16Q8NEE8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TTC16Q8NEE8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.87■□□□□ 0.93
TTC16Q8NEE8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.87■□□□□ 0.93
TTC16Q8NEE8 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.87■□□□□ 0.93
TTC16Q8NEE8 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TTC16Q8NEE8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TTC16Q8NEE8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TTC16Q8NEE8 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TTC16Q8NEE8 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TTC16Q8NEE8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TTC16Q8NEE8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TTC16Q8NEE8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.86■□□□□ 0.93
TTC16Q8NEE8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.86■□□□□ 0.93
TTC16Q8NEE8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.86■□□□□ 0.93
TTC16Q8NEE8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TTC16Q8NEE8 AC110285.5-201ENST00000611501 352 ntBASIC20.86■□□□□ 0.93
TTC16Q8NEE8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.86■□□□□ 0.93
TTC16Q8NEE8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.86■□□□□ 0.93
TTC16Q8NEE8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TTC16Q8NEE8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.86■□□□□ 0.93
TTC16Q8NEE8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
TTC16Q8NEE8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TTC16Q8NEE8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC16Q8NEE8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.85■□□□□ 0.93
TTC16Q8NEE8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.85■□□□□ 0.93
TTC16Q8NEE8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC16Q8NEE8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.85■□□□□ 0.93
TTC16Q8NEE8 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TTC16Q8NEE8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC16Q8NEE8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.85■□□□□ 0.93
TTC16Q8NEE8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC16Q8NEE8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC16Q8NEE8 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC16Q8NEE8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC16Q8NEE8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TTC16Q8NEE8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TTC16Q8NEE8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC16Q8NEE8 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC16Q8NEE8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC16Q8NEE8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.85■□□□□ 0.93
TTC16Q8NEE8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.85■□□□□ 0.93
TTC16Q8NEE8 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TTC16Q8NEE8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TTC16Q8NEE8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC16Q8NEE8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TTC16Q8NEE8 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC16Q8NEE8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.85■□□□□ 0.93
TTC16Q8NEE8 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC16Q8NEE8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.85■□□□□ 0.93
TTC16Q8NEE8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TTC16Q8NEE8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC16Q8NEE8 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.84■□□□□ 0.93
TTC16Q8NEE8 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
TTC16Q8NEE8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.84■□□□□ 0.93
TTC16Q8NEE8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
TTC16Q8NEE8 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TTC16Q8NEE8 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TTC16Q8NEE8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TTC16Q8NEE8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TTC16Q8NEE8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.84■□□□□ 0.93
TTC16Q8NEE8 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TTC16Q8NEE8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
TTC16Q8NEE8 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.84■□□□□ 0.93
TTC16Q8NEE8 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TTC16Q8NEE8 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
TTC16Q8NEE8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TTC16Q8NEE8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.84■□□□□ 0.93
TTC16Q8NEE8 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TTC16Q8NEE8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TTC16Q8NEE8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
TTC16Q8NEE8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TTC16Q8NEE8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TTC16Q8NEE8 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TTC16Q8NEE8 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.83■□□□□ 0.93
TTC16Q8NEE8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
TTC16Q8NEE8 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TTC16Q8NEE8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TTC16Q8NEE8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.83■□□□□ 0.92
TTC16Q8NEE8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.83■□□□□ 0.92
TTC16Q8NEE8 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TTC16Q8NEE8 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.83■□□□□ 0.92
TTC16Q8NEE8 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TTC16Q8NEE8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms