Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
CFAP43Q8NDM7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
CFAP43Q8NDM7 CRYGFP-201ENST00000418459 633 ntBASIC31.32■■■□□ 2.6
CFAP43Q8NDM7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC31.32■■■□□ 2.6
CFAP43Q8NDM7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
CFAP43Q8NDM7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CFAP43Q8NDM7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
CFAP43Q8NDM7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CFAP43Q8NDM7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CFAP43Q8NDM7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CFAP43Q8NDM7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC31.31■■■□□ 2.6
CFAP43Q8NDM7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
CFAP43Q8NDM7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC31.31■■■□□ 2.6
CFAP43Q8NDM7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC31.31■■■□□ 2.6
CFAP43Q8NDM7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC31.31■■■□□ 2.6
CFAP43Q8NDM7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
CFAP43Q8NDM7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CFAP43Q8NDM7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CFAP43Q8NDM7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CFAP43Q8NDM7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
CFAP43Q8NDM7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC31.3■■■□□ 2.6
CFAP43Q8NDM7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
CFAP43Q8NDM7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC31.3■■■□□ 2.6
CFAP43Q8NDM7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
CFAP43Q8NDM7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC31.3■■■□□ 2.6
CFAP43Q8NDM7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC31.3■■■□□ 2.6
CFAP43Q8NDM7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CFAP43Q8NDM7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CFAP43Q8NDM7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CFAP43Q8NDM7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC31.29■■■□□ 2.6
CFAP43Q8NDM7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
CFAP43Q8NDM7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC31.29■■■□□ 2.6
CFAP43Q8NDM7 AC005229.4-201ENST00000610085 2198 ntBASIC31.29■■■□□ 2.6
CFAP43Q8NDM7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CFAP43Q8NDM7 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CFAP43Q8NDM7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
CFAP43Q8NDM7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
CFAP43Q8NDM7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CFAP43Q8NDM7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CFAP43Q8NDM7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC31.28■■■□□ 2.6
CFAP43Q8NDM7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC31.28■■■□□ 2.6
CFAP43Q8NDM7 KSR1P1-201ENST00000446298 240 ntBASIC31.28■■■□□ 2.6
CFAP43Q8NDM7 C2orf69P3-201ENST00000565542 1120 ntBASIC31.28■■■□□ 2.6
CFAP43Q8NDM7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC31.28■■■□□ 2.6
CFAP43Q8NDM7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
CFAP43Q8NDM7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CFAP43Q8NDM7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC31.27■■■□□ 2.6
CFAP43Q8NDM7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC31.27■■■□□ 2.6
CFAP43Q8NDM7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC31.27■■■□□ 2.6
CFAP43Q8NDM7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC31.27■■■□□ 2.6
CFAP43Q8NDM7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
CFAP43Q8NDM7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
CFAP43Q8NDM7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC31.26■■■□□ 2.6
CFAP43Q8NDM7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC31.26■■■□□ 2.6
CFAP43Q8NDM7 AL358472.4-201ENST00000633140 710 ntBASIC31.26■■■□□ 2.6
CFAP43Q8NDM7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC31.26■■■□□ 2.6
CFAP43Q8NDM7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
CFAP43Q8NDM7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
CFAP43Q8NDM7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.59
CFAP43Q8NDM7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC31.26■■■□□ 2.59
CFAP43Q8NDM7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC31.25■■■□□ 2.59
CFAP43Q8NDM7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC31.25■■■□□ 2.59
CFAP43Q8NDM7 AC004264.1-201ENST00000608354 794 ntBASIC31.25■■■□□ 2.59
CFAP43Q8NDM7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC31.25■■■□□ 2.59
CFAP43Q8NDM7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CFAP43Q8NDM7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC31.25■■■□□ 2.59
CFAP43Q8NDM7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC31.25■■■□□ 2.59
CFAP43Q8NDM7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CFAP43Q8NDM7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
CFAP43Q8NDM7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CFAP43Q8NDM7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CFAP43Q8NDM7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC31.25■■■□□ 2.59
CFAP43Q8NDM7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CFAP43Q8NDM7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CFAP43Q8NDM7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CFAP43Q8NDM7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
CFAP43Q8NDM7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
CFAP43Q8NDM7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
CFAP43Q8NDM7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
CFAP43Q8NDM7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
CFAP43Q8NDM7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC31.25■■■□□ 2.59
CFAP43Q8NDM7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC31.25■■■□□ 2.59
CFAP43Q8NDM7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
CFAP43Q8NDM7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC31.24■■■□□ 2.59
CFAP43Q8NDM7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC31.24■■■□□ 2.59
CFAP43Q8NDM7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CFAP43Q8NDM7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC31.24■■■□□ 2.59
CFAP43Q8NDM7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC31.24■■■□□ 2.59
CFAP43Q8NDM7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC31.24■■■□□ 2.59
CFAP43Q8NDM7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC31.24■■■□□ 2.59
CFAP43Q8NDM7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC31.24■■■□□ 2.59
CFAP43Q8NDM7 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC31.24■■■□□ 2.59
CFAP43Q8NDM7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
CFAP43Q8NDM7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CFAP43Q8NDM7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC31.23■■■□□ 2.59
CFAP43Q8NDM7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CFAP43Q8NDM7 AC063952.2-201ENST00000498792 1227 ntBASIC31.23■■■□□ 2.59
CFAP43Q8NDM7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC31.23■■■□□ 2.59
CFAP43Q8NDM7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
CFAP43Q8NDM7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms