Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TMEFF1Q8IYR6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMEFF1Q8IYR6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TMEFF1Q8IYR6 AC121338.2-201ENST00000622535 1744 ntBASIC19.82■□□□□ 0.76
TMEFF1Q8IYR6 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMEFF1Q8IYR6 AF106564.1-201ENST00000607058 2553 ntBASIC19.82■□□□□ 0.76
TMEFF1Q8IYR6 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TMEFF1Q8IYR6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMEFF1Q8IYR6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TMEFF1Q8IYR6 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMEFF1Q8IYR6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
TMEFF1Q8IYR6 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.81■□□□□ 0.76
TMEFF1Q8IYR6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.81■□□□□ 0.76
TMEFF1Q8IYR6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.81■□□□□ 0.76
TMEFF1Q8IYR6 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.81■□□□□ 0.76
TMEFF1Q8IYR6 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.81■□□□□ 0.76
TMEFF1Q8IYR6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMEFF1Q8IYR6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TMEFF1Q8IYR6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TMEFF1Q8IYR6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMEFF1Q8IYR6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
TMEFF1Q8IYR6 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.8■□□□□ 0.76
TMEFF1Q8IYR6 AC007375.3-201ENST00000600936 2314 ntBASIC19.8■□□□□ 0.76
TMEFF1Q8IYR6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEFF1Q8IYR6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TMEFF1Q8IYR6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.8■□□□□ 0.76
TMEFF1Q8IYR6 KRT8P20-201ENST00000423953 1409 ntBASIC19.8■□□□□ 0.76
TMEFF1Q8IYR6 AC073508.3-201ENST00000619697 1419 ntBASIC19.8■□□□□ 0.76
TMEFF1Q8IYR6 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TMEFF1Q8IYR6 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TMEFF1Q8IYR6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.8■□□□□ 0.76
TMEFF1Q8IYR6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
TMEFF1Q8IYR6 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.8■□□□□ 0.76
TMEFF1Q8IYR6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEFF1Q8IYR6 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEFF1Q8IYR6 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEFF1Q8IYR6 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEFF1Q8IYR6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEFF1Q8IYR6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.79■□□□□ 0.76
TMEFF1Q8IYR6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TMEFF1Q8IYR6 AC026310.3-201ENST00000625186 2373 ntBASIC19.79■□□□□ 0.76
TMEFF1Q8IYR6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.79■□□□□ 0.76
TMEFF1Q8IYR6 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEFF1Q8IYR6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TMEFF1Q8IYR6 AL024507.2-201ENST00000606070 2574 ntBASIC19.79■□□□□ 0.76
TMEFF1Q8IYR6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TMEFF1Q8IYR6 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEFF1Q8IYR6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEFF1Q8IYR6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.79■□□□□ 0.76
TMEFF1Q8IYR6 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.79■□□□□ 0.76
TMEFF1Q8IYR6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.79■□□□□ 0.76
TMEFF1Q8IYR6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TMEFF1Q8IYR6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.79■□□□□ 0.76
TMEFF1Q8IYR6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TMEFF1Q8IYR6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.79■□□□□ 0.76
TMEFF1Q8IYR6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.79■□□□□ 0.76
TMEFF1Q8IYR6 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.79■□□□□ 0.76
TMEFF1Q8IYR6 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TMEFF1Q8IYR6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
TMEFF1Q8IYR6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEFF1Q8IYR6 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.79■□□□□ 0.76
TMEFF1Q8IYR6 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TMEFF1Q8IYR6 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TMEFF1Q8IYR6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
TMEFF1Q8IYR6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TMEFF1Q8IYR6 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEFF1Q8IYR6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TMEFF1Q8IYR6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEFF1Q8IYR6 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEFF1Q8IYR6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.78■□□□□ 0.76
TMEFF1Q8IYR6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEFF1Q8IYR6 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TMEFF1Q8IYR6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.78■□□□□ 0.76
TMEFF1Q8IYR6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.78■□□□□ 0.76
TMEFF1Q8IYR6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEFF1Q8IYR6 AC104076.2-201ENST00000448912 469 ntBASIC19.78■□□□□ 0.76
TMEFF1Q8IYR6 DUX4L26-201ENST00000489078 1255 ntBASIC19.78■□□□□ 0.76
TMEFF1Q8IYR6 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.78■□□□□ 0.76
TMEFF1Q8IYR6 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.78■□□□□ 0.76
TMEFF1Q8IYR6 NTF6B-201ENST00000591913 560 ntBASIC19.78■□□□□ 0.76
TMEFF1Q8IYR6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.78■□□□□ 0.76
TMEFF1Q8IYR6 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.78■□□□□ 0.76
TMEFF1Q8IYR6 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.78■□□□□ 0.76
TMEFF1Q8IYR6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TMEFF1Q8IYR6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEFF1Q8IYR6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMEFF1Q8IYR6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMEFF1Q8IYR6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TMEFF1Q8IYR6 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMEFF1Q8IYR6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
TMEFF1Q8IYR6 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.77■□□□□ 0.76
TMEFF1Q8IYR6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
TMEFF1Q8IYR6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TMEFF1Q8IYR6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TMEFF1Q8IYR6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMEFF1Q8IYR6 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
TMEFF1Q8IYR6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.76■□□□□ 0.75
TMEFF1Q8IYR6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.76■□□□□ 0.75
TMEFF1Q8IYR6 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TMEFF1Q8IYR6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms