Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.6■□□□□ 0.41
LINC00346Q8IVM7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC00346Q8IVM7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.6■□□□□ 0.41
LINC00346Q8IVM7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC00346Q8IVM7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.6■□□□□ 0.41
LINC00346Q8IVM7 AC073111.5-205ENST00000641717 521 ntBASIC17.6■□□□□ 0.41
LINC00346Q8IVM7 KRT8P17-201ENST00000453110 1448 ntBASIC17.6■□□□□ 0.41
LINC00346Q8IVM7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LINC00346Q8IVM7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC00346Q8IVM7 TMEM179-206ENST00000616017 1645 ntBASIC17.6■□□□□ 0.41
LINC00346Q8IVM7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.6■□□□□ 0.41
LINC00346Q8IVM7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC00346Q8IVM7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC00346Q8IVM7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.6■□□□□ 0.41
LINC00346Q8IVM7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LINC00346Q8IVM7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00346Q8IVM7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00346Q8IVM7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.59■□□□□ 0.41
LINC00346Q8IVM7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
LINC00346Q8IVM7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.59■□□□□ 0.41
LINC00346Q8IVM7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
LINC00346Q8IVM7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00346Q8IVM7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00346Q8IVM7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.59■□□□□ 0.41
LINC00346Q8IVM7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00346Q8IVM7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.59■□□□□ 0.41
LINC00346Q8IVM7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00346Q8IVM7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.59■□□□□ 0.41
LINC00346Q8IVM7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00346Q8IVM7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00346Q8IVM7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
LINC00346Q8IVM7 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LINC00346Q8IVM7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
LINC00346Q8IVM7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.59■□□□□ 0.41
LINC00346Q8IVM7 AL589743.5-201ENST00000616611 1050 ntBASIC17.59■□□□□ 0.41
LINC00346Q8IVM7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00346Q8IVM7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
LINC00346Q8IVM7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00346Q8IVM7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00346Q8IVM7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00346Q8IVM7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.59■□□□□ 0.41
LINC00346Q8IVM7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00346Q8IVM7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LINC00346Q8IVM7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LINC00346Q8IVM7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LINC00346Q8IVM7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
LINC00346Q8IVM7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LINC00346Q8IVM7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC00346Q8IVM7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LINC00346Q8IVM7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC00346Q8IVM7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.58■□□□□ 0.4
LINC00346Q8IVM7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LINC00346Q8IVM7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.58■□□□□ 0.4
LINC00346Q8IVM7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.58■□□□□ 0.4
LINC00346Q8IVM7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.58■□□□□ 0.4
LINC00346Q8IVM7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.58■□□□□ 0.4
LINC00346Q8IVM7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LINC00346Q8IVM7 AL031963.3-201ENST00000606441 850 ntBASIC17.58■□□□□ 0.4
LINC00346Q8IVM7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC00346Q8IVM7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.58■□□□□ 0.4
LINC00346Q8IVM7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC00346Q8IVM7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC00346Q8IVM7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LINC00346Q8IVM7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LINC00346Q8IVM7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
LINC00346Q8IVM7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC00346Q8IVM7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC00346Q8IVM7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.57■□□□□ 0.4
LINC00346Q8IVM7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00346Q8IVM7 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
LINC00346Q8IVM7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00346Q8IVM7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00346Q8IVM7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00346Q8IVM7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00346Q8IVM7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.57■□□□□ 0.4
LINC00346Q8IVM7 AL137784.2-201ENST00000607332 1000 ntBASIC17.57■□□□□ 0.4
LINC00346Q8IVM7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00346Q8IVM7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.57■□□□□ 0.4
LINC00346Q8IVM7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00346Q8IVM7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00346Q8IVM7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
LINC00346Q8IVM7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LINC00346Q8IVM7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00346Q8IVM7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LINC00346Q8IVM7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.57■□□□□ 0.4
LINC00346Q8IVM7 KRT8P20-201ENST00000423953 1409 ntBASIC17.56■□□□□ 0.4
LINC00346Q8IVM7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00346Q8IVM7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00346Q8IVM7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LINC00346Q8IVM7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00346Q8IVM7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00346Q8IVM7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00346Q8IVM7 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00346Q8IVM7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00346Q8IVM7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00346Q8IVM7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00346Q8IVM7 CDCA4P2-201ENST00000441182 718 ntBASIC17.56■□□□□ 0.4
LINC00346Q8IVM7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.56■□□□□ 0.4
LINC00346Q8IVM7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.56■□□□□ 0.4
LINC00346Q8IVM7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms