Protein–RNA interactions for Protein: Q86XS8

RNF130, E3 ubiquitin-protein ligase RNF130, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF130Q86XS8 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF130Q86XS8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF130Q86XS8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RNF130Q86XS8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF130Q86XS8 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF130Q86XS8 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF130Q86XS8 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF130Q86XS8 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RNF130Q86XS8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF130Q86XS8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF130Q86XS8 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF130Q86XS8 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF130Q86XS8 AC007322.1-201ENST00000426983 750 ntBASIC18.69■□□□□ 0.58
RNF130Q86XS8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF130Q86XS8 AL031963.3-201ENST00000606441 850 ntBASIC18.69■□□□□ 0.58
RNF130Q86XS8 AC231657.2-201ENST00000624556 255 ntBASIC18.69■□□□□ 0.58
RNF130Q86XS8 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF130Q86XS8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF130Q86XS8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF130Q86XS8 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF130Q86XS8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF130Q86XS8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF130Q86XS8 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF130Q86XS8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF130Q86XS8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF130Q86XS8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.69■□□□□ 0.58
RNF130Q86XS8 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF130Q86XS8 TREX1-205ENST00000625293 1783 ntBASIC18.68■□□□□ 0.58
RNF130Q86XS8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF130Q86XS8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF130Q86XS8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF130Q86XS8 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF130Q86XS8 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.68■□□□□ 0.58
RNF130Q86XS8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF130Q86XS8 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF130Q86XS8 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.68■□□□□ 0.58
RNF130Q86XS8 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.68■□□□□ 0.58
RNF130Q86XS8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF130Q86XS8 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF130Q86XS8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF130Q86XS8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF130Q86XS8 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF130Q86XS8 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF130Q86XS8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
RNF130Q86XS8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF130Q86XS8 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF130Q86XS8 AC087289.5-201ENST00000586076 3175 ntBASIC18.68■□□□□ 0.58
RNF130Q86XS8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF130Q86XS8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RNF130Q86XS8 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF130Q86XS8 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF130Q86XS8 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF130Q86XS8 KRT8P20-201ENST00000423953 1409 ntBASIC18.67■□□□□ 0.58
RNF130Q86XS8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF130Q86XS8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF130Q86XS8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RNF130Q86XS8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF130Q86XS8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
RNF130Q86XS8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF130Q86XS8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF130Q86XS8 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF130Q86XS8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.67■□□□□ 0.58
RNF130Q86XS8 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF130Q86XS8 MIR5787-201ENST00000611784 55 ntBASIC18.67■□□□□ 0.58
RNF130Q86XS8 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF130Q86XS8 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF130Q86XS8 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF130Q86XS8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RNF130Q86XS8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF130Q86XS8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF130Q86XS8 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RNF130Q86XS8 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.67■□□□□ 0.58
RNF130Q86XS8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF130Q86XS8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF130Q86XS8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF130Q86XS8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF130Q86XS8 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF130Q86XS8 KRT16P6-202ENST00000425692 1426 ntBASIC18.66■□□□□ 0.58
RNF130Q86XS8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF130Q86XS8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF130Q86XS8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF130Q86XS8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF130Q86XS8 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.66■□□□□ 0.58
RNF130Q86XS8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF130Q86XS8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF130Q86XS8 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF130Q86XS8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF130Q86XS8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF130Q86XS8 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF130Q86XS8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.66■□□□□ 0.58
RNF130Q86XS8 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF130Q86XS8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF130Q86XS8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF130Q86XS8 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF130Q86XS8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF130Q86XS8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF130Q86XS8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF130Q86XS8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF130Q86XS8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF130Q86XS8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms