Protein–RNA interactions for Protein: Q86V81

ALYREF, THO complex subunit 4, humanhuman

Known RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREFQ86V81 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ALYREFQ86V81 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ALYREFQ86V81 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ALYREFQ86V81 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ALYREFQ86V81 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ALYREFQ86V81 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ALYREFQ86V81 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.8■□□□□ 0.92
ALYREFQ86V81 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.8■□□□□ 0.92
ALYREFQ86V81 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
ALYREFQ86V81 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
ALYREFQ86V81 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ALYREFQ86V81 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ALYREFQ86V81 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
ALYREFQ86V81 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.8■□□□□ 0.92
ALYREFQ86V81 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.8■□□□□ 0.92
ALYREFQ86V81 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.8■□□□□ 0.92
ALYREFQ86V81 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ALYREFQ86V81 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ALYREFQ86V81 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ALYREFQ86V81 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ALYREFQ86V81 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ALYREFQ86V81 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ALYREFQ86V81 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ALYREFQ86V81 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ALYREFQ86V81 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ALYREFQ86V81 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALYREFQ86V81 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ALYREFQ86V81 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ALYREFQ86V81 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.79■□□□□ 0.92
ALYREFQ86V81 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.79■□□□□ 0.92
ALYREFQ86V81 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ALYREFQ86V81 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
ALYREFQ86V81 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.79■□□□□ 0.92
ALYREFQ86V81 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.79■□□□□ 0.92
ALYREFQ86V81 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.79■□□□□ 0.92
ALYREFQ86V81 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.79■□□□□ 0.92
ALYREFQ86V81 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
ALYREFQ86V81 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.79■□□□□ 0.92
ALYREFQ86V81 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.79■□□□□ 0.92
ALYREFQ86V81 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.79■□□□□ 0.92
ALYREFQ86V81 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.79■□□□□ 0.92
ALYREFQ86V81 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALYREFQ86V81 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALYREFQ86V81 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALYREFQ86V81 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ALYREFQ86V81 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ALYREFQ86V81 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ALYREFQ86V81 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.79■□□□□ 0.92
ALYREFQ86V81 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ALYREFQ86V81 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALYREFQ86V81 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.79■□□□□ 0.92
ALYREFQ86V81 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALYREFQ86V81 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALYREFQ86V81 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALYREFQ86V81 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ALYREFQ86V81 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALYREFQ86V81 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ALYREFQ86V81 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.78■□□□□ 0.92
ALYREFQ86V81 AL049796.1-201ENST00000565336 1766 ntBASIC20.78■□□□□ 0.92
ALYREFQ86V81 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ALYREFQ86V81 KRASP1-201ENST00000407852 552 ntBASIC20.78■□□□□ 0.92
ALYREFQ86V81 AC079089.2-201ENST00000531211 1277 ntBASIC20.78■□□□□ 0.92
ALYREFQ86V81 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.78■□□□□ 0.92
ALYREFQ86V81 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ALYREFQ86V81 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.78■□□□□ 0.92
ALYREFQ86V81 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ALYREFQ86V81 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.78■□□□□ 0.92
ALYREFQ86V81 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALYREFQ86V81 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALYREFQ86V81 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.78■□□□□ 0.92
ALYREFQ86V81 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
ALYREFQ86V81 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ALYREFQ86V81 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.78■□□□□ 0.92
ALYREFQ86V81 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.78■□□□□ 0.92
ALYREFQ86V81 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALYREFQ86V81 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALYREFQ86V81 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.77■□□□□ 0.92
ALYREFQ86V81 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALYREFQ86V81 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALYREFQ86V81 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALYREFQ86V81 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALYREFQ86V81 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALYREFQ86V81 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.77■□□□□ 0.92
ALYREFQ86V81 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
ALYREFQ86V81 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.77■□□□□ 0.92
ALYREFQ86V81 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
ALYREFQ86V81 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.77■□□□□ 0.92
ALYREFQ86V81 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.77■□□□□ 0.92
ALYREFQ86V81 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.77■□□□□ 0.92
ALYREFQ86V81 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALYREFQ86V81 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
ALYREFQ86V81 KRT18P22-201ENST00000402024 1347 ntBASIC20.77■□□□□ 0.91
ALYREFQ86V81 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALYREFQ86V81 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALYREFQ86V81 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ALYREFQ86V81 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
ALYREFQ86V81 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALYREFQ86V81 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALYREFQ86V81 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALYREFQ86V81 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms