Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LCA10Q71F78 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
LCA10Q71F78 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC10.71□□□□□ -0.7
LCA10Q71F78 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LCA10Q71F78 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LCA10Q71F78 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC10.7□□□□□ -0.7
LCA10Q71F78 STX6-204ENST00000542060 4809 ntTSL 2 BASIC10.7□□□□□ -0.7
LCA10Q71F78 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
LCA10Q71F78 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC10.7□□□□□ -0.7
LCA10Q71F78 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LCA10Q71F78 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC10.7□□□□□ -0.7
LCA10Q71F78 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
LCA10Q71F78 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LCA10Q71F78 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LCA10Q71F78 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
LCA10Q71F78 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
LCA10Q71F78 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LCA10Q71F78 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
LCA10Q71F78 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
LCA10Q71F78 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LCA10Q71F78 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
LCA10Q71F78 C17orf82-201ENST00000623772 1530 ntBASIC10.7□□□□□ -0.7
LCA10Q71F78 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
LCA10Q71F78 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LCA10Q71F78 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
LCA10Q71F78 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LCA10Q71F78 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LCA10Q71F78 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
LCA10Q71F78 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
LCA10Q71F78 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
LCA10Q71F78 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC10.7□□□□□ -0.7
LCA10Q71F78 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC10.7□□□□□ -0.7
LCA10Q71F78 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC10.7□□□□□ -0.7
LCA10Q71F78 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LCA10Q71F78 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
LCA10Q71F78 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC10.7□□□□□ -0.7
LCA10Q71F78 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC10.7□□□□□ -0.7
LCA10Q71F78 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC10.7□□□□□ -0.7
LCA10Q71F78 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC10.7□□□□□ -0.7
LCA10Q71F78 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
LCA10Q71F78 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LCA10Q71F78 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
LCA10Q71F78 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LCA10Q71F78 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
LCA10Q71F78 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
LCA10Q71F78 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
LCA10Q71F78 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LCA10Q71F78 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LCA10Q71F78 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LCA10Q71F78 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
LCA10Q71F78 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
LCA10Q71F78 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LCA10Q71F78 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
LCA10Q71F78 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LCA10Q71F78 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LCA10Q71F78 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC10.7□□□□□ -0.7
LCA10Q71F78 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
LCA10Q71F78 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
LCA10Q71F78 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
LCA10Q71F78 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LCA10Q71F78 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LCA10Q71F78 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC10.69□□□□□ -0.7
LCA10Q71F78 CEP83-AS1-201ENST00000623122 2482 ntBASIC10.69□□□□□ -0.7
LCA10Q71F78 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LCA10Q71F78 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC10.69□□□□□ -0.7
LCA10Q71F78 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LCA10Q71F78 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
LCA10Q71F78 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
LCA10Q71F78 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LCA10Q71F78 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
LCA10Q71F78 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LCA10Q71F78 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC10.69□□□□□ -0.7
LCA10Q71F78 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
LCA10Q71F78 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LCA10Q71F78 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LCA10Q71F78 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
LCA10Q71F78 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC10.69□□□□□ -0.7
LCA10Q71F78 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC10.69□□□□□ -0.7
LCA10Q71F78 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LCA10Q71F78 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LCA10Q71F78 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC10.69□□□□□ -0.7
LCA10Q71F78 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC10.69□□□□□ -0.7
LCA10Q71F78 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
LCA10Q71F78 TFPT-201ENST00000391757 774 ntTSL 5 BASIC10.69□□□□□ -0.7
LCA10Q71F78 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
LCA10Q71F78 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LCA10Q71F78 HES6-204ENST00000409182 863 ntTSL 2 BASIC10.69□□□□□ -0.7
LCA10Q71F78 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LCA10Q71F78 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC10.69□□□□□ -0.7
LCA10Q71F78 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LCA10Q71F78 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
LCA10Q71F78 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LCA10Q71F78 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LCA10Q71F78 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LCA10Q71F78 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
LCA10Q71F78 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC10.69□□□□□ -0.7
LCA10Q71F78 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
LCA10Q71F78 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LCA10Q71F78 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LCA10Q71F78 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC10.69□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms