Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASC4Q6P4E1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.26■□□□□ 0.83
CASC4Q6P4E1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.26■□□□□ 0.83
CASC4Q6P4E1 BID-214ENST00000617586 542 ntTSL 5 BASIC20.26■□□□□ 0.83
CASC4Q6P4E1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.26■□□□□ 0.83
CASC4Q6P4E1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASC4Q6P4E1 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASC4Q6P4E1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASC4Q6P4E1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CASC4Q6P4E1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.26■□□□□ 0.83
CASC4Q6P4E1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASC4Q6P4E1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASC4Q6P4E1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASC4Q6P4E1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.26■□□□□ 0.83
CASC4Q6P4E1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CASC4Q6P4E1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CASC4Q6P4E1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CASC4Q6P4E1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CASC4Q6P4E1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CASC4Q6P4E1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
CASC4Q6P4E1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CASC4Q6P4E1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CASC4Q6P4E1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
CASC4Q6P4E1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.25■□□□□ 0.83
CASC4Q6P4E1 AC006015.1-201ENST00000429970 570 ntBASIC20.25■□□□□ 0.83
CASC4Q6P4E1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
CASC4Q6P4E1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CASC4Q6P4E1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
CASC4Q6P4E1 AC069236.1-201ENST00000604339 616 ntBASIC20.25■□□□□ 0.83
CASC4Q6P4E1 AC100791.3-201ENST00000617619 330 ntBASIC20.25■□□□□ 0.83
CASC4Q6P4E1 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.25■□□□□ 0.83
CASC4Q6P4E1 AC008694.1-202ENST00000636953 945 ntBASIC20.25■□□□□ 0.83
CASC4Q6P4E1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.25■□□□□ 0.83
CASC4Q6P4E1 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CASC4Q6P4E1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CASC4Q6P4E1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CASC4Q6P4E1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CASC4Q6P4E1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.25■□□□□ 0.83
CASC4Q6P4E1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CASC4Q6P4E1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.24■□□□□ 0.83
CASC4Q6P4E1 TMEM179-206ENST00000616017 1645 ntBASIC20.24■□□□□ 0.83
CASC4Q6P4E1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CASC4Q6P4E1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CASC4Q6P4E1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CASC4Q6P4E1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CASC4Q6P4E1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CASC4Q6P4E1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.24■□□□□ 0.83
CASC4Q6P4E1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CASC4Q6P4E1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.24■□□□□ 0.83
CASC4Q6P4E1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CASC4Q6P4E1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CASC4Q6P4E1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CASC4Q6P4E1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.24■□□□□ 0.83
CASC4Q6P4E1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.24■□□□□ 0.83
CASC4Q6P4E1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CASC4Q6P4E1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.24■□□□□ 0.83
CASC4Q6P4E1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CASC4Q6P4E1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CASC4Q6P4E1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.24■□□□□ 0.83
CASC4Q6P4E1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CASC4Q6P4E1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CASC4Q6P4E1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CASC4Q6P4E1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CASC4Q6P4E1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CASC4Q6P4E1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CASC4Q6P4E1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CASC4Q6P4E1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CASC4Q6P4E1 KRT18P68-201ENST00000392293 1000 ntBASIC20.23■□□□□ 0.83
CASC4Q6P4E1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CASC4Q6P4E1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.23■□□□□ 0.83
CASC4Q6P4E1 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CASC4Q6P4E1 CYP2T1P-201ENST00000432607 1285 ntBASIC20.23■□□□□ 0.83
CASC4Q6P4E1 AL162430.1-201ENST00000480705 870 ntBASIC20.23■□□□□ 0.83
CASC4Q6P4E1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.23■□□□□ 0.83
CASC4Q6P4E1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.23■□□□□ 0.83
CASC4Q6P4E1 MIR5787-201ENST00000611784 55 ntBASIC20.23■□□□□ 0.83
CASC4Q6P4E1 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CASC4Q6P4E1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CASC4Q6P4E1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CASC4Q6P4E1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CASC4Q6P4E1 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CASC4Q6P4E1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CASC4Q6P4E1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.22■□□□□ 0.83
CASC4Q6P4E1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.22■□□□□ 0.83
CASC4Q6P4E1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CASC4Q6P4E1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CASC4Q6P4E1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CASC4Q6P4E1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.22■□□□□ 0.83
CASC4Q6P4E1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.22■□□□□ 0.83
CASC4Q6P4E1 AC105020.6-201ENST00000621523 1217 ntBASIC20.22■□□□□ 0.83
CASC4Q6P4E1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.22■□□□□ 0.83
CASC4Q6P4E1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CASC4Q6P4E1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.22■□□□□ 0.83
CASC4Q6P4E1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CASC4Q6P4E1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.22■□□□□ 0.83
CASC4Q6P4E1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.22■□□□□ 0.83
CASC4Q6P4E1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CASC4Q6P4E1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CASC4Q6P4E1 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CASC4Q6P4E1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms