Protein–RNA interactions for Protein: Q6IMN6

CAPRIN2, Caprin-2, humanhuman

Known RBP Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN2Q6IMN6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPRIN2Q6IMN6 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.06■□□□□ 0.8
CAPRIN2Q6IMN6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPRIN2Q6IMN6 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CAPRIN2Q6IMN6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CAPRIN2Q6IMN6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CAPRIN2Q6IMN6 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CAPRIN2Q6IMN6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPRIN2Q6IMN6 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.06■□□□□ 0.8
CAPRIN2Q6IMN6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.06■□□□□ 0.8
CAPRIN2Q6IMN6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPRIN2Q6IMN6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPRIN2Q6IMN6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CAPRIN2Q6IMN6 MIPEPP3-201ENST00000412105 444 ntBASIC20.06■□□□□ 0.8
CAPRIN2Q6IMN6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.06■□□□□ 0.8
CAPRIN2Q6IMN6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
CAPRIN2Q6IMN6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.06■□□□□ 0.8
CAPRIN2Q6IMN6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.06■□□□□ 0.8
CAPRIN2Q6IMN6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.06■□□□□ 0.8
CAPRIN2Q6IMN6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.06■□□□□ 0.8
CAPRIN2Q6IMN6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.06■□□□□ 0.8
CAPRIN2Q6IMN6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CAPRIN2Q6IMN6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.06■□□□□ 0.8
CAPRIN2Q6IMN6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.06■□□□□ 0.8
CAPRIN2Q6IMN6 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.06■□□□□ 0.8
CAPRIN2Q6IMN6 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.06■□□□□ 0.8
CAPRIN2Q6IMN6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.06■□□□□ 0.8
CAPRIN2Q6IMN6 AC121338.2-201ENST00000622535 1744 ntBASIC20.06■□□□□ 0.8
CAPRIN2Q6IMN6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.06■□□□□ 0.8
CAPRIN2Q6IMN6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPRIN2Q6IMN6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.06■□□□□ 0.8
CAPRIN2Q6IMN6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CAPRIN2Q6IMN6 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
CAPRIN2Q6IMN6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPRIN2Q6IMN6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPRIN2Q6IMN6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CAPRIN2Q6IMN6 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPRIN2Q6IMN6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CAPRIN2Q6IMN6 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CAPRIN2Q6IMN6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPRIN2Q6IMN6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CAPRIN2Q6IMN6 MCRIP2P1-201ENST00000394346 511 ntBASIC20.05■□□□□ 0.8
CAPRIN2Q6IMN6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
CAPRIN2Q6IMN6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CAPRIN2Q6IMN6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CAPRIN2Q6IMN6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.05■□□□□ 0.8
CAPRIN2Q6IMN6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CAPRIN2Q6IMN6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPRIN2Q6IMN6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.05■□□□□ 0.8
CAPRIN2Q6IMN6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPRIN2Q6IMN6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPRIN2Q6IMN6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPRIN2Q6IMN6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.05■□□□□ 0.8
CAPRIN2Q6IMN6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPRIN2Q6IMN6 CYP21A1P-202ENST00000354927 1481 ntBASIC20.05■□□□□ 0.8
CAPRIN2Q6IMN6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.04■□□□□ 0.8
CAPRIN2Q6IMN6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPRIN2Q6IMN6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPRIN2Q6IMN6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.04■□□□□ 0.8
CAPRIN2Q6IMN6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
CAPRIN2Q6IMN6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CAPRIN2Q6IMN6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CAPRIN2Q6IMN6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPRIN2Q6IMN6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPRIN2Q6IMN6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPRIN2Q6IMN6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.04■□□□□ 0.8
CAPRIN2Q6IMN6 AL138781.1-201ENST00000566567 1274 ntBASIC20.04■□□□□ 0.8
CAPRIN2Q6IMN6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.04■□□□□ 0.8
CAPRIN2Q6IMN6 CYP2T3P-201ENST00000601990 817 ntBASIC20.04■□□□□ 0.8
CAPRIN2Q6IMN6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.04■□□□□ 0.8
CAPRIN2Q6IMN6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.04■□□□□ 0.8
CAPRIN2Q6IMN6 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.04■□□□□ 0.8
CAPRIN2Q6IMN6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CAPRIN2Q6IMN6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CAPRIN2Q6IMN6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CAPRIN2Q6IMN6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CAPRIN2Q6IMN6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPRIN2Q6IMN6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPRIN2Q6IMN6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CAPRIN2Q6IMN6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.04■□□□□ 0.8
CAPRIN2Q6IMN6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CAPRIN2Q6IMN6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPRIN2Q6IMN6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPRIN2Q6IMN6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPRIN2Q6IMN6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CAPRIN2Q6IMN6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPRIN2Q6IMN6 TNXA-203ENST00000507684 2038 ntBASIC20.03■□□□□ 0.8
CAPRIN2Q6IMN6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.03■□□□□ 0.8
CAPRIN2Q6IMN6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CAPRIN2Q6IMN6 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CAPRIN2Q6IMN6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CAPRIN2Q6IMN6 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.03■□□□□ 0.8
CAPRIN2Q6IMN6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CAPRIN2Q6IMN6 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CAPRIN2Q6IMN6 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CAPRIN2Q6IMN6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.03■□□□□ 0.8
CAPRIN2Q6IMN6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CAPRIN2Q6IMN6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CAPRIN2Q6IMN6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CAPRIN2Q6IMN6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms