Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ARFGEF3Q5TH69 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
ARFGEF3Q5TH69 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ARFGEF3Q5TH69 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
ARFGEF3Q5TH69 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ARFGEF3Q5TH69 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ARFGEF3Q5TH69 KRT8P20-201ENST00000423953 1409 ntBASIC16.92■□□□□ 0.3
ARFGEF3Q5TH69 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.92■□□□□ 0.3
ARFGEF3Q5TH69 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ARFGEF3Q5TH69 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ARFGEF3Q5TH69 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ARFGEF3Q5TH69 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ARFGEF3Q5TH69 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ARFGEF3Q5TH69 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ARFGEF3Q5TH69 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.92■□□□□ 0.3
ARFGEF3Q5TH69 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.92■□□□□ 0.3
ARFGEF3Q5TH69 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.92■□□□□ 0.3
ARFGEF3Q5TH69 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ARFGEF3Q5TH69 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.92■□□□□ 0.3
ARFGEF3Q5TH69 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
ARFGEF3Q5TH69 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ARFGEF3Q5TH69 KRT8P17-201ENST00000453110 1448 ntBASIC16.92■□□□□ 0.3
ARFGEF3Q5TH69 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.91■□□□□ 0.3
ARFGEF3Q5TH69 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.91■□□□□ 0.3
ARFGEF3Q5TH69 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
ARFGEF3Q5TH69 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARFGEF3Q5TH69 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ARFGEF3Q5TH69 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARFGEF3Q5TH69 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
ARFGEF3Q5TH69 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ARFGEF3Q5TH69 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.91■□□□□ 0.3
ARFGEF3Q5TH69 AL353807.1-201ENST00000427475 662 ntBASIC16.91■□□□□ 0.3
ARFGEF3Q5TH69 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARFGEF3Q5TH69 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ARFGEF3Q5TH69 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.91■□□□□ 0.3
ARFGEF3Q5TH69 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.91■□□□□ 0.3
ARFGEF3Q5TH69 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.91■□□□□ 0.3
ARFGEF3Q5TH69 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ARFGEF3Q5TH69 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.91■□□□□ 0.3
ARFGEF3Q5TH69 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ARFGEF3Q5TH69 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARFGEF3Q5TH69 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ARFGEF3Q5TH69 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARFGEF3Q5TH69 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.91■□□□□ 0.3
ARFGEF3Q5TH69 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARFGEF3Q5TH69 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARFGEF3Q5TH69 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ARFGEF3Q5TH69 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.91■□□□□ 0.3
ARFGEF3Q5TH69 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.91■□□□□ 0.3
ARFGEF3Q5TH69 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ARFGEF3Q5TH69 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.91■□□□□ 0.3
ARFGEF3Q5TH69 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.91■□□□□ 0.3
ARFGEF3Q5TH69 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.91■□□□□ 0.3
ARFGEF3Q5TH69 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ARFGEF3Q5TH69 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARFGEF3Q5TH69 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARFGEF3Q5TH69 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARFGEF3Q5TH69 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARFGEF3Q5TH69 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.9■□□□□ 0.3
ARFGEF3Q5TH69 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.9■□□□□ 0.3
ARFGEF3Q5TH69 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
ARFGEF3Q5TH69 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARFGEF3Q5TH69 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARFGEF3Q5TH69 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARFGEF3Q5TH69 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARFGEF3Q5TH69 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ARFGEF3Q5TH69 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARFGEF3Q5TH69 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.9■□□□□ 0.3
ARFGEF3Q5TH69 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARFGEF3Q5TH69 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARFGEF3Q5TH69 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.9■□□□□ 0.3
ARFGEF3Q5TH69 BX088651.1-201ENST00000540551 451 ntBASIC16.9■□□□□ 0.3
ARFGEF3Q5TH69 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.9■□□□□ 0.3
ARFGEF3Q5TH69 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.9■□□□□ 0.3
ARFGEF3Q5TH69 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ARFGEF3Q5TH69 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARFGEF3Q5TH69 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ARFGEF3Q5TH69 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.9■□□□□ 0.3
ARFGEF3Q5TH69 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARFGEF3Q5TH69 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ARFGEF3Q5TH69 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ARFGEF3Q5TH69 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ARFGEF3Q5TH69 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.9■□□□□ 0.3
ARFGEF3Q5TH69 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ARFGEF3Q5TH69 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
ARFGEF3Q5TH69 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
ARFGEF3Q5TH69 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
ARFGEF3Q5TH69 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.3
ARFGEF3Q5TH69 MIR4785-201ENST00000585005 73 ntBASIC16.89■□□□□ 0.3
ARFGEF3Q5TH69 AP001412.1-201ENST00000608405 714 ntBASIC16.89■□□□□ 0.3
ARFGEF3Q5TH69 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.89■□□□□ 0.3
ARFGEF3Q5TH69 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.89■□□□□ 0.3
ARFGEF3Q5TH69 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.89■□□□□ 0.29
ARFGEF3Q5TH69 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.89■□□□□ 0.29
ARFGEF3Q5TH69 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ARFGEF3Q5TH69 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ARFGEF3Q5TH69 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ARFGEF3Q5TH69 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ARFGEF3Q5TH69 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ARFGEF3Q5TH69 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms