Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.96■□□□□ 0.95
PTPN20Q4JDL3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.96■□□□□ 0.95
PTPN20Q4JDL3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN20Q4JDL3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PTPN20Q4JDL3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN20Q4JDL3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN20Q4JDL3 TMEM179-206ENST00000616017 1645 ntBASIC20.96■□□□□ 0.95
PTPN20Q4JDL3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN20Q4JDL3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
PTPN20Q4JDL3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN20Q4JDL3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
PTPN20Q4JDL3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.95■□□□□ 0.95
PTPN20Q4JDL3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
PTPN20Q4JDL3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN20Q4JDL3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN20Q4JDL3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN20Q4JDL3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN20Q4JDL3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PTPN20Q4JDL3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PTPN20Q4JDL3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.95■□□□□ 0.94
PTPN20Q4JDL3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN20Q4JDL3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.95■□□□□ 0.94
PTPN20Q4JDL3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
PTPN20Q4JDL3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.95■□□□□ 0.94
PTPN20Q4JDL3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN20Q4JDL3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
PTPN20Q4JDL3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.95■□□□□ 0.94
PTPN20Q4JDL3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN20Q4JDL3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
PTPN20Q4JDL3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN20Q4JDL3 PHGDH-210ENST00000641115 1638 ntBASIC20.95■□□□□ 0.94
PTPN20Q4JDL3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN20Q4JDL3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN20Q4JDL3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.95■□□□□ 0.94
PTPN20Q4JDL3 AC124283.5-201ENST00000624661 1809 ntBASIC20.94■□□□□ 0.94
PTPN20Q4JDL3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN20Q4JDL3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN20Q4JDL3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.94■□□□□ 0.94
PTPN20Q4JDL3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.94■□□□□ 0.94
PTPN20Q4JDL3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.94■□□□□ 0.94
PTPN20Q4JDL3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PTPN20Q4JDL3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
PTPN20Q4JDL3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.94■□□□□ 0.94
PTPN20Q4JDL3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN20Q4JDL3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN20Q4JDL3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN20Q4JDL3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
PTPN20Q4JDL3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN20Q4JDL3 AC009237.14-201ENST00000609975 1594 ntBASIC20.93■□□□□ 0.94
PTPN20Q4JDL3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
PTPN20Q4JDL3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPN20Q4JDL3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPN20Q4JDL3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PTPN20Q4JDL3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPN20Q4JDL3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPN20Q4JDL3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
PTPN20Q4JDL3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.93■□□□□ 0.94
PTPN20Q4JDL3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PTPN20Q4JDL3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.93■□□□□ 0.94
PTPN20Q4JDL3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPN20Q4JDL3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPN20Q4JDL3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.93■□□□□ 0.94
PTPN20Q4JDL3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.93■□□□□ 0.94
PTPN20Q4JDL3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.93■□□□□ 0.94
PTPN20Q4JDL3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN20Q4JDL3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PTPN20Q4JDL3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN20Q4JDL3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PTPN20Q4JDL3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.92■□□□□ 0.94
PTPN20Q4JDL3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN20Q4JDL3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.92■□□□□ 0.94
PTPN20Q4JDL3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN20Q4JDL3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN20Q4JDL3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.92■□□□□ 0.94
PTPN20Q4JDL3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.92■□□□□ 0.94
PTPN20Q4JDL3 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.92■□□□□ 0.94
PTPN20Q4JDL3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.92■□□□□ 0.94
PTPN20Q4JDL3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN20Q4JDL3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.92■□□□□ 0.94
PTPN20Q4JDL3 SOX15-203ENST00000570788 1093 ntBASIC20.92■□□□□ 0.94
PTPN20Q4JDL3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.92■□□□□ 0.94
PTPN20Q4JDL3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN20Q4JDL3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN20Q4JDL3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN20Q4JDL3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.92■□□□□ 0.94
PTPN20Q4JDL3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.92■□□□□ 0.94
PTPN20Q4JDL3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.92■□□□□ 0.94
PTPN20Q4JDL3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.91■□□□□ 0.94
PTPN20Q4JDL3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN20Q4JDL3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN20Q4JDL3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN20Q4JDL3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN20Q4JDL3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN20Q4JDL3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN20Q4JDL3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN20Q4JDL3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN20Q4JDL3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.91■□□□□ 0.94
PTPN20Q4JDL3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN20Q4JDL3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.91■□□□□ 0.94
PTPN20Q4JDL3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms