Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 MYCNOS-205ENST00000641950 531 ntBASIC17.56■□□□□ 0.4
ODF4Q2M2E3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ODF4Q2M2E3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ODF4Q2M2E3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ODF4Q2M2E3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ODF4Q2M2E3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.55■□□□□ 0.4
ODF4Q2M2E3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
ODF4Q2M2E3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
ODF4Q2M2E3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ODF4Q2M2E3 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.55■□□□□ 0.4
ODF4Q2M2E3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ODF4Q2M2E3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
ODF4Q2M2E3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.55■□□□□ 0.4
ODF4Q2M2E3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ODF4Q2M2E3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ODF4Q2M2E3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
ODF4Q2M2E3 AC098818.2-201ENST00000564925 2320 ntBASIC17.55■□□□□ 0.4
ODF4Q2M2E3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ODF4Q2M2E3 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.55■□□□□ 0.4
ODF4Q2M2E3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
ODF4Q2M2E3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ODF4Q2M2E3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ODF4Q2M2E3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ODF4Q2M2E3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ODF4Q2M2E3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ODF4Q2M2E3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ODF4Q2M2E3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ODF4Q2M2E3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ODF4Q2M2E3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ODF4Q2M2E3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.54■□□□□ 0.4
ODF4Q2M2E3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ODF4Q2M2E3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ODF4Q2M2E3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ODF4Q2M2E3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.54■□□□□ 0.4
ODF4Q2M2E3 AL356652.1-201ENST00000615962 565 ntBASIC17.54■□□□□ 0.4
ODF4Q2M2E3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.54■□□□□ 0.4
ODF4Q2M2E3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ODF4Q2M2E3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.54■□□□□ 0.4
ODF4Q2M2E3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ODF4Q2M2E3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ODF4Q2M2E3 AL020996.1-203ENST00000536896 2307 ntBASIC17.54■□□□□ 0.4
ODF4Q2M2E3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.54■□□□□ 0.4
ODF4Q2M2E3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ODF4Q2M2E3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
ODF4Q2M2E3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.54■□□□□ 0.4
ODF4Q2M2E3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.54■□□□□ 0.4
ODF4Q2M2E3 TMEM179-206ENST00000616017 1645 ntBASIC17.54■□□□□ 0.4
ODF4Q2M2E3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.53■□□□□ 0.4
ODF4Q2M2E3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
ODF4Q2M2E3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
ODF4Q2M2E3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ODF4Q2M2E3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ODF4Q2M2E3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ODF4Q2M2E3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ODF4Q2M2E3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ODF4Q2M2E3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ODF4Q2M2E3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.53■□□□□ 0.4
ODF4Q2M2E3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ODF4Q2M2E3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.53■□□□□ 0.4
ODF4Q2M2E3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ODF4Q2M2E3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ODF4Q2M2E3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ODF4Q2M2E3 AC097381.1-201ENST00000429019 1296 ntBASIC17.53■□□□□ 0.4
ODF4Q2M2E3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ODF4Q2M2E3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms