Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
LSM6P62312 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LSM6P62312 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LSM6P62312 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
LSM6P62312 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
LSM6P62312 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.46■□□□□ 0.39
LSM6P62312 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LSM6P62312 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.46■□□□□ 0.39
LSM6P62312 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.46■□□□□ 0.39
LSM6P62312 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LSM6P62312 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LSM6P62312 DUSP5P2-201ENST00000426873 1033 ntBASIC17.46■□□□□ 0.39
LSM6P62312 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
LSM6P62312 GUSBP6-202ENST00000438529 1198 ntBASIC17.46■□□□□ 0.39
LSM6P62312 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.46■□□□□ 0.39
LSM6P62312 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.46■□□□□ 0.39
LSM6P62312 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.46■□□□□ 0.39
LSM6P62312 MIR4758-201ENST00000577688 71 ntBASIC17.46■□□□□ 0.39
LSM6P62312 AC092666.2-201ENST00000613287 246 ntBASIC17.46■□□□□ 0.39
LSM6P62312 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.46■□□□□ 0.39
LSM6P62312 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LSM6P62312 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.46■□□□□ 0.39
LSM6P62312 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.46■□□□□ 0.39
LSM6P62312 PHGDH-210ENST00000641115 1638 ntBASIC17.46■□□□□ 0.39
LSM6P62312 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LSM6P62312 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.46■□□□□ 0.39
LSM6P62312 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.46■□□□□ 0.38
LSM6P62312 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.38
LSM6P62312 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.46■□□□□ 0.38
LSM6P62312 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
LSM6P62312 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
LSM6P62312 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LSM6P62312 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LSM6P62312 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.45■□□□□ 0.38
LSM6P62312 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.45■□□□□ 0.38
LSM6P62312 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
LSM6P62312 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.45■□□□□ 0.38
LSM6P62312 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LSM6P62312 AC125437.2-201ENST00000625180 2167 ntBASIC17.45■□□□□ 0.38
LSM6P62312 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
LSM6P62312 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LSM6P62312 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LSM6P62312 AC073210.2-201ENST00000430369 194 ntBASIC17.45■□□□□ 0.38
LSM6P62312 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LSM6P62312 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.45■□□□□ 0.38
LSM6P62312 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.45■□□□□ 0.38
LSM6P62312 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.45■□□□□ 0.38
LSM6P62312 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.45■□□□□ 0.38
LSM6P62312 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.45■□□□□ 0.38
LSM6P62312 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LSM6P62312 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.45■□□□□ 0.38
LSM6P62312 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
LSM6P62312 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.45■□□□□ 0.38
LSM6P62312 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.45■□□□□ 0.38
LSM6P62312 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.45■□□□□ 0.38
LSM6P62312 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.45■□□□□ 0.38
LSM6P62312 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LSM6P62312 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LSM6P62312 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LSM6P62312 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LSM6P62312 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LSM6P62312 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LSM6P62312 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LSM6P62312 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LSM6P62312 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSM6P62312 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.44■□□□□ 0.38
LSM6P62312 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.44■□□□□ 0.38
LSM6P62312 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSM6P62312 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LSM6P62312 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.44■□□□□ 0.38
LSM6P62312 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.44■□□□□ 0.38
LSM6P62312 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSM6P62312 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSM6P62312 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.44■□□□□ 0.38
LSM6P62312 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LSM6P62312 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LSM6P62312 AL390719.1-204ENST00000412397 1219 ntBASIC17.44■□□□□ 0.38
LSM6P62312 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.44■□□□□ 0.38
LSM6P62312 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.44■□□□□ 0.38
LSM6P62312 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.44■□□□□ 0.38
LSM6P62312 AC091874.3-201ENST00000512672 1195 ntBASIC17.44■□□□□ 0.38
LSM6P62312 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.44■□□□□ 0.38
LSM6P62312 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.44■□□□□ 0.38
LSM6P62312 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.44■□□□□ 0.38
LSM6P62312 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSM6P62312 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSM6P62312 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSM6P62312 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSM6P62312 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
LSM6P62312 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.44■□□□□ 0.38
LSM6P62312 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
LSM6P62312 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.44■□□□□ 0.38
LSM6P62312 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
LSM6P62312 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSM6P62312 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
LSM6P62312 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.44■□□□□ 0.38
LSM6P62312 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.43■□□□□ 0.38
LSM6P62312 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.43■□□□□ 0.38
LSM6P62312 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.43■□□□□ 0.38
LSM6P62312 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms