Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSM3P62310 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.91■□□□□ 0.46
LSM3P62310 DPP3P2-201ENST00000416030 1696 ntBASIC17.91■□□□□ 0.46
LSM3P62310 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSM3P62310 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSM3P62310 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.91■□□□□ 0.46
LSM3P62310 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.91■□□□□ 0.46
LSM3P62310 MIR4787-201ENST00000607364 84 ntBASIC17.91■□□□□ 0.46
LSM3P62310 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LSM3P62310 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSM3P62310 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSM3P62310 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
LSM3P62310 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSM3P62310 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LSM3P62310 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSM3P62310 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.91■□□□□ 0.46
LSM3P62310 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSM3P62310 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.91■□□□□ 0.46
LSM3P62310 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSM3P62310 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSM3P62310 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSM3P62310 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSM3P62310 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LSM3P62310 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
LSM3P62310 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LSM3P62310 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LSM3P62310 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSM3P62310 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSM3P62310 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.9■□□□□ 0.46
LSM3P62310 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LSM3P62310 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
LSM3P62310 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LSM3P62310 SMUG1P1-201ENST00000590640 811 ntBASIC17.9■□□□□ 0.46
LSM3P62310 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.9■□□□□ 0.46
LSM3P62310 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.9■□□□□ 0.46
LSM3P62310 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LSM3P62310 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LSM3P62310 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.9■□□□□ 0.46
LSM3P62310 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.9■□□□□ 0.46
LSM3P62310 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LSM3P62310 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.9■□□□□ 0.46
LSM3P62310 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LSM3P62310 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.9■□□□□ 0.46
LSM3P62310 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSM3P62310 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.9■□□□□ 0.46
LSM3P62310 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.9■□□□□ 0.46
LSM3P62310 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.9■□□□□ 0.46
LSM3P62310 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSM3P62310 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.46
LSM3P62310 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
LSM3P62310 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
LSM3P62310 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSM3P62310 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSM3P62310 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.89■□□□□ 0.45
LSM3P62310 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSM3P62310 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSM3P62310 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LSM3P62310 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
LSM3P62310 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSM3P62310 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LSM3P62310 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSM3P62310 BX119927.1-201ENST00000636596 1552 ntBASIC17.89■□□□□ 0.45
LSM3P62310 AL390961.4-201ENST00000623958 2535 ntBASIC17.89■□□□□ 0.45
LSM3P62310 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSM3P62310 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.89■□□□□ 0.45
LSM3P62310 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
LSM3P62310 AP005435.1-201ENST00000529293 1178 ntBASIC17.89■□□□□ 0.45
LSM3P62310 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.89■□□□□ 0.45
LSM3P62310 MIR2861-201ENST00000636310 90 ntBASIC17.89■□□□□ 0.45
LSM3P62310 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.89■□□□□ 0.45
LSM3P62310 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSM3P62310 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSM3P62310 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSM3P62310 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
LSM3P62310 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSM3P62310 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.89■□□□□ 0.45
LSM3P62310 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
LSM3P62310 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSM3P62310 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
LSM3P62310 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSM3P62310 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSM3P62310 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSM3P62310 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
LSM3P62310 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
LSM3P62310 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.88■□□□□ 0.45
LSM3P62310 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSM3P62310 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSM3P62310 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.88■□□□□ 0.45
LSM3P62310 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
LSM3P62310 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
LSM3P62310 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
LSM3P62310 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSM3P62310 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSM3P62310 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.88■□□□□ 0.45
LSM3P62310 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.88■□□□□ 0.45
LSM3P62310 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSM3P62310 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.88■□□□□ 0.45
LSM3P62310 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.88■□□□□ 0.45
LSM3P62310 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LSM3P62310 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms