Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2NP61088 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
UBE2NP61088 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
UBE2NP61088 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2NP61088 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2NP61088 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2NP61088 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2NP61088 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2NP61088 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
UBE2NP61088 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.48■□□□□ 0.39
UBE2NP61088 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2NP61088 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2NP61088 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2NP61088 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2NP61088 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2NP61088 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2NP61088 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.47■□□□□ 0.39
UBE2NP61088 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2NP61088 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2NP61088 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2NP61088 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2NP61088 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2NP61088 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2NP61088 ABHD17AP1-201ENST00000358206 933 ntBASIC17.47■□□□□ 0.39
UBE2NP61088 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.47■□□□□ 0.39
UBE2NP61088 POM121L13P-201ENST00000422362 380 ntBASIC17.47■□□□□ 0.39
UBE2NP61088 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2NP61088 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.47■□□□□ 0.39
UBE2NP61088 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2NP61088 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.47■□□□□ 0.39
UBE2NP61088 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.47■□□□□ 0.39
UBE2NP61088 AC120498.8-201ENST00000614275 531 ntBASIC17.47■□□□□ 0.39
UBE2NP61088 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.47■□□□□ 0.39
UBE2NP61088 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
UBE2NP61088 AP005212.1-201ENST00000581547 1997 ntBASIC17.47■□□□□ 0.39
UBE2NP61088 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2NP61088 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.47■□□□□ 0.39
UBE2NP61088 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2NP61088 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.47■□□□□ 0.39
UBE2NP61088 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2NP61088 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
UBE2NP61088 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
UBE2NP61088 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2NP61088 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
UBE2NP61088 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBE2NP61088 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBE2NP61088 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBE2NP61088 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBE2NP61088 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBE2NP61088 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.46■□□□□ 0.39
UBE2NP61088 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBE2NP61088 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBE2NP61088 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
UBE2NP61088 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.46■□□□□ 0.39
UBE2NP61088 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.46■□□□□ 0.39
UBE2NP61088 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.46■□□□□ 0.39
UBE2NP61088 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.46■□□□□ 0.39
UBE2NP61088 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.46■□□□□ 0.39
UBE2NP61088 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBE2NP61088 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBE2NP61088 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.46■□□□□ 0.39
UBE2NP61088 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBE2NP61088 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UBE2NP61088 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.46■□□□□ 0.39
UBE2NP61088 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBE2NP61088 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.46■□□□□ 0.39
UBE2NP61088 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBE2NP61088 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UBE2NP61088 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
UBE2NP61088 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
UBE2NP61088 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
UBE2NP61088 GABARAPL3-202ENST00000624044 1851 ntBASIC17.46■□□□□ 0.38
UBE2NP61088 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
UBE2NP61088 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2NP61088 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2NP61088 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2NP61088 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2NP61088 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2NP61088 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
UBE2NP61088 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2NP61088 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.45■□□□□ 0.38
UBE2NP61088 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
UBE2NP61088 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2NP61088 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.45■□□□□ 0.38
UBE2NP61088 AC008403.3-201ENST00000598924 454 ntBASIC17.45■□□□□ 0.38
UBE2NP61088 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
UBE2NP61088 ITM2C-210ENST00000620962 501 ntBASIC17.45■□□□□ 0.38
UBE2NP61088 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2NP61088 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.45■□□□□ 0.38
UBE2NP61088 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.45■□□□□ 0.38
UBE2NP61088 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.45■□□□□ 0.38
UBE2NP61088 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2NP61088 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
UBE2NP61088 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2NP61088 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBE2NP61088 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBE2NP61088 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
UBE2NP61088 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
UBE2NP61088 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBE2NP61088 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms