Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 AC026471.5-201ENST00000615068 467 ntBASIC19.68■□□□□ 0.74
CLDN2P57739 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN2P57739 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CLDN2P57739 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.68■□□□□ 0.74
CLDN2P57739 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN2P57739 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.67■□□□□ 0.74
CLDN2P57739 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN2P57739 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN2P57739 SMG8-203ENST00000578922 2178 ntBASIC19.67■□□□□ 0.74
CLDN2P57739 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN2P57739 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN2P57739 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN2P57739 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN2P57739 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.67■□□□□ 0.74
CLDN2P57739 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.67■□□□□ 0.74
CLDN2P57739 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN2P57739 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.67■□□□□ 0.74
CLDN2P57739 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.67■□□□□ 0.74
CLDN2P57739 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.67■□□□□ 0.74
CLDN2P57739 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.67■□□□□ 0.74
CLDN2P57739 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.67■□□□□ 0.74
CLDN2P57739 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CLDN2P57739 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN2P57739 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
CLDN2P57739 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN2P57739 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN2P57739 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.66■□□□□ 0.74
CLDN2P57739 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN2P57739 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN2P57739 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.66■□□□□ 0.74
CLDN2P57739 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN2P57739 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.66■□□□□ 0.74
CLDN2P57739 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN2P57739 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN2P57739 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.66■□□□□ 0.74
CLDN2P57739 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.66■□□□□ 0.74
CLDN2P57739 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.66■□□□□ 0.74
CLDN2P57739 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.66■□□□□ 0.74
CLDN2P57739 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.66■□□□□ 0.74
CLDN2P57739 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN2P57739 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.66■□□□□ 0.74
CLDN2P57739 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.66■□□□□ 0.74
CLDN2P57739 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN2P57739 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CLDN2P57739 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.66■□□□□ 0.74
CLDN2P57739 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.66■□□□□ 0.74
CLDN2P57739 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN2P57739 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
CLDN2P57739 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
CLDN2P57739 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN2P57739 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN2P57739 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN2P57739 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN2P57739 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN2P57739 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN2P57739 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CLDN2P57739 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CLDN2P57739 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN2P57739 AL353807.1-201ENST00000427475 662 ntBASIC19.65■□□□□ 0.74
CLDN2P57739 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.65■□□□□ 0.74
CLDN2P57739 AP003071.4-201ENST00000562276 1284 ntBASIC19.65■□□□□ 0.74
CLDN2P57739 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.65■□□□□ 0.74
CLDN2P57739 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.65■□□□□ 0.74
CLDN2P57739 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.65■□□□□ 0.74
CLDN2P57739 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
CLDN2P57739 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN2P57739 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.65■□□□□ 0.74
CLDN2P57739 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN2P57739 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN2P57739 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN2P57739 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN2P57739 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CLDN2P57739 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.64■□□□□ 0.74
CLDN2P57739 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLDN2P57739 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN2P57739 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN2P57739 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.64■□□□□ 0.73
CLDN2P57739 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN2P57739 AL355355.2-201ENST00000442321 338 ntBASIC19.64■□□□□ 0.73
CLDN2P57739 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN2P57739 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.64■□□□□ 0.73
CLDN2P57739 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.64■□□□□ 0.73
CLDN2P57739 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
CLDN2P57739 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.64■□□□□ 0.73
CLDN2P57739 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
CLDN2P57739 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CLDN2P57739 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.64■□□□□ 0.73
CLDN2P57739 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.64■□□□□ 0.73
CLDN2P57739 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.64■□□□□ 0.73
CLDN2P57739 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CLDN2P57739 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.64■□□□□ 0.73
CLDN2P57739 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN2P57739 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN2P57739 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.64■□□□□ 0.73
CLDN2P57739 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN2P57739 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.64■□□□□ 0.73
CLDN2P57739 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN2P57739 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CLDN2P57739 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN2P57739 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms