Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AL512408.1-201ENST00000569378 2000 ntBASIC17.79■□□□□ 0.44
CLDN18P56856 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN18P56856 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN18P56856 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CLDN18P56856 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN18P56856 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.79■□□□□ 0.44
CLDN18P56856 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN18P56856 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN18P56856 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN18P56856 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.79■□□□□ 0.44
CLDN18P56856 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN18P56856 Z99916.2-201ENST00000604037 246 ntBASIC17.79■□□□□ 0.44
CLDN18P56856 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN18P56856 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN18P56856 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN18P56856 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN18P56856 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN18P56856 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CLDN18P56856 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN18P56856 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN18P56856 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN18P56856 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN18P56856 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN18P56856 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN18P56856 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN18P56856 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN18P56856 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN18P56856 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN18P56856 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN18P56856 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CLDN18P56856 MIR718-201ENST00000390190 70 ntBASIC17.78■□□□□ 0.44
CLDN18P56856 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN18P56856 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN18P56856 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN18P56856 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN18P56856 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.78■□□□□ 0.44
CLDN18P56856 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.78■□□□□ 0.44
CLDN18P56856 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN18P56856 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN18P56856 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CLDN18P56856 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN18P56856 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN18P56856 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN18P56856 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN18P56856 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN18P56856 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN18P56856 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
CLDN18P56856 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN18P56856 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN18P56856 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CLDN18P56856 AC018553.1-201ENST00000616682 1458 ntBASIC17.77■□□□□ 0.44
CLDN18P56856 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN18P56856 PHGDH-210ENST00000641115 1638 ntBASIC17.77■□□□□ 0.44
CLDN18P56856 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.77■□□□□ 0.44
CLDN18P56856 AL162377.1-201ENST00000618844 1793 ntBASIC17.77■□□□□ 0.44
CLDN18P56856 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN18P56856 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CLDN18P56856 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN18P56856 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CLDN18P56856 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN18P56856 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.77■□□□□ 0.44
CLDN18P56856 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN18P56856 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.77■□□□□ 0.44
CLDN18P56856 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.77■□□□□ 0.44
CLDN18P56856 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.77■□□□□ 0.44
CLDN18P56856 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN18P56856 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.77■□□□□ 0.44
CLDN18P56856 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN18P56856 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN18P56856 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN18P56856 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CLDN18P56856 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN18P56856 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN18P56856 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN18P56856 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN18P56856 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CLDN18P56856 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN18P56856 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN18P56856 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN18P56856 TFP1-202ENST00000475455 1573 ntBASIC17.76■□□□□ 0.43
CLDN18P56856 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN18P56856 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN18P56856 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN18P56856 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CLDN18P56856 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN18P56856 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CLDN18P56856 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.76■□□□□ 0.43
CLDN18P56856 KRT16P5-201ENST00000455284 522 ntBASIC17.76■□□□□ 0.43
CLDN18P56856 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN18P56856 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN18P56856 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.76■□□□□ 0.43
CLDN18P56856 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CLDN18P56856 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN18P56856 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN18P56856 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN18P56856 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.76■□□□□ 0.43
CLDN18P56856 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN18P56856 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN18P56856 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN18P56856 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms