Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN6P56747 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.15■□□□□ 0.66
CLDN6P56747 NIFKP9-201ENST00000419265 221 ntBASIC19.15■□□□□ 0.66
CLDN6P56747 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN6P56747 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDN6P56747 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDN6P56747 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.15■□□□□ 0.66
CLDN6P56747 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDN6P56747 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CLDN6P56747 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN6P56747 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CLDN6P56747 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDN6P56747 KRT16P1-201ENST00000399124 1418 ntBASIC19.15■□□□□ 0.66
CLDN6P56747 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN6P56747 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
CLDN6P56747 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLDN6P56747 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLDN6P56747 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN6P56747 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN6P56747 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN6P56747 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN6P56747 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN6P56747 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN6P56747 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.14■□□□□ 0.65
CLDN6P56747 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN6P56747 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN6P56747 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.14■□□□□ 0.65
CLDN6P56747 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.14■□□□□ 0.65
CLDN6P56747 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.14■□□□□ 0.65
CLDN6P56747 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.14■□□□□ 0.65
CLDN6P56747 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN6P56747 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.14■□□□□ 0.65
CLDN6P56747 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN6P56747 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CLDN6P56747 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CLDN6P56747 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN6P56747 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
CLDN6P56747 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN6P56747 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN6P56747 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN6P56747 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.13■□□□□ 0.65
CLDN6P56747 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN6P56747 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN6P56747 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.13■□□□□ 0.65
CLDN6P56747 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN6P56747 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CLDN6P56747 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN6P56747 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CLDN6P56747 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.13■□□□□ 0.65
CLDN6P56747 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.13■□□□□ 0.65
CLDN6P56747 KSR1P1-201ENST00000446298 240 ntBASIC19.13■□□□□ 0.65
CLDN6P56747 ECEL1P2-202ENST00000465689 757 ntBASIC19.13■□□□□ 0.65
CLDN6P56747 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
CLDN6P56747 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.13■□□□□ 0.65
CLDN6P56747 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CLDN6P56747 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.13■□□□□ 0.65
CLDN6P56747 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN6P56747 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.13■□□□□ 0.65
CLDN6P56747 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN6P56747 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN6P56747 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN6P56747 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
CLDN6P56747 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
CLDN6P56747 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN6P56747 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
CLDN6P56747 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.13■□□□□ 0.65
CLDN6P56747 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN6P56747 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN6P56747 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN6P56747 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN6P56747 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.12■□□□□ 0.65
CLDN6P56747 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN6P56747 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN6P56747 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.12■□□□□ 0.65
CLDN6P56747 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN6P56747 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN6P56747 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
CLDN6P56747 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN6P56747 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN6P56747 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.11■□□□□ 0.65
CLDN6P56747 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN6P56747 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN6P56747 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN6P56747 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN6P56747 INGX-201ENST00000359239 846 ntBASIC19.11■□□□□ 0.65
CLDN6P56747 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN6P56747 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.11■□□□□ 0.65
CLDN6P56747 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CLDN6P56747 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN6P56747 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN6P56747 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN6P56747 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN6P56747 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.1■□□□□ 0.65
CLDN6P56747 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN6P56747 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CLDN6P56747 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN6P56747 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN6P56747 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.1■□□□□ 0.65
CLDN6P56747 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN6P56747 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms