Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CDH13P55290 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
CDH13P55290 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDH13P55290 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH13P55290 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CDH13P55290 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.43■□□□□ 0.7
CDH13P55290 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDH13P55290 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.43■□□□□ 0.7
CDH13P55290 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CDH13P55290 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CDH13P55290 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH13P55290 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH13P55290 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.42■□□□□ 0.7
CDH13P55290 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH13P55290 AC093484.2-201ENST00000580996 2166 ntBASIC19.42■□□□□ 0.7
CDH13P55290 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH13P55290 CYP2T1P-201ENST00000432607 1285 ntBASIC19.42■□□□□ 0.7
CDH13P55290 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.42■□□□□ 0.7
CDH13P55290 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.42■□□□□ 0.7
CDH13P55290 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.42■□□□□ 0.7
CDH13P55290 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.42■□□□□ 0.7
CDH13P55290 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.42■□□□□ 0.7
CDH13P55290 BID-214ENST00000617586 542 ntTSL 5 BASIC19.42■□□□□ 0.7
CDH13P55290 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDH13P55290 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.42■□□□□ 0.7
CDH13P55290 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.42■□□□□ 0.7
CDH13P55290 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CDH13P55290 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CDH13P55290 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH13P55290 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH13P55290 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH13P55290 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH13P55290 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH13P55290 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.41■□□□□ 0.7
CDH13P55290 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH13P55290 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH13P55290 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
CDH13P55290 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH13P55290 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH13P55290 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH13P55290 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH13P55290 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH13P55290 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH13P55290 CYP2T3P-201ENST00000601990 817 ntBASIC19.41■□□□□ 0.7
CDH13P55290 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH13P55290 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH13P55290 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CDH13P55290 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH13P55290 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH13P55290 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH13P55290 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH13P55290 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH13P55290 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH13P55290 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CDH13P55290 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CDH13P55290 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH13P55290 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH13P55290 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH13P55290 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDH13P55290 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.4■□□□□ 0.7
CDH13P55290 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH13P55290 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
CDH13P55290 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDH13P55290 AL162430.1-201ENST00000480705 870 ntBASIC19.4■□□□□ 0.7
CDH13P55290 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.4■□□□□ 0.7
CDH13P55290 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.4■□□□□ 0.7
CDH13P55290 AL031963.3-201ENST00000606441 850 ntBASIC19.4■□□□□ 0.7
CDH13P55290 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CDH13P55290 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.4■□□□□ 0.7
CDH13P55290 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH13P55290 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDH13P55290 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDH13P55290 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.39■□□□□ 0.7
CDH13P55290 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CDH13P55290 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.39■□□□□ 0.7
CDH13P55290 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH13P55290 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH13P55290 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH13P55290 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH13P55290 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.39■□□□□ 0.69
CDH13P55290 AC069236.1-201ENST00000604339 616 ntBASIC19.39■□□□□ 0.69
CDH13P55290 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.39■□□□□ 0.69
CDH13P55290 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.39■□□□□ 0.69
CDH13P55290 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH13P55290 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH13P55290 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
CDH13P55290 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDH13P55290 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.39■□□□□ 0.69
CDH13P55290 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.39■□□□□ 0.69
CDH13P55290 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.39■□□□□ 0.69
CDH13P55290 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH13P55290 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH13P55290 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDH13P55290 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.39■□□□□ 0.69
CDH13P55290 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CDH13P55290 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.38■□□□□ 0.69
CDH13P55290 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH13P55290 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CDH13P55290 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CDH13P55290 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms