Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH12P55289 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH12P55289 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH12P55289 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH12P55289 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH12P55289 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDH12P55289 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
CDH12P55289 AC093484.2-201ENST00000580996 2166 ntBASIC18.49■□□□□ 0.55
CDH12P55289 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH12P55289 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH12P55289 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.49■□□□□ 0.55
CDH12P55289 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH12P55289 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.49■□□□□ 0.55
CDH12P55289 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.49■□□□□ 0.55
CDH12P55289 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDH12P55289 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH12P55289 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CDH12P55289 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.49■□□□□ 0.55
CDH12P55289 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH12P55289 KRT18P11-201ENST00000435214 1283 ntBASIC18.49■□□□□ 0.55
CDH12P55289 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDH12P55289 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDH12P55289 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CDH12P55289 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CDH12P55289 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.49■□□□□ 0.55
CDH12P55289 TREX1-205ENST00000625293 1783 ntBASIC18.49■□□□□ 0.55
CDH12P55289 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDH12P55289 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDH12P55289 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH12P55289 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.49■□□□□ 0.55
CDH12P55289 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
CDH12P55289 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
CDH12P55289 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH12P55289 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH12P55289 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH12P55289 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH12P55289 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.48■□□□□ 0.55
CDH12P55289 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH12P55289 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.48■□□□□ 0.55
CDH12P55289 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.48■□□□□ 0.55
CDH12P55289 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.48■□□□□ 0.55
CDH12P55289 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.48■□□□□ 0.55
CDH12P55289 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.48■□□□□ 0.55
CDH12P55289 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.48■□□□□ 0.55
CDH12P55289 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CDH12P55289 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.48■□□□□ 0.55
CDH12P55289 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.48■□□□□ 0.55
CDH12P55289 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH12P55289 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CDH12P55289 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDH12P55289 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH12P55289 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
CDH12P55289 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
CDH12P55289 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH12P55289 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.48■□□□□ 0.55
CDH12P55289 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH12P55289 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.48■□□□□ 0.55
CDH12P55289 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.48■□□□□ 0.55
CDH12P55289 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.48■□□□□ 0.55
CDH12P55289 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH12P55289 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH12P55289 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH12P55289 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.47■□□□□ 0.55
CDH12P55289 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
CDH12P55289 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.47■□□□□ 0.55
CDH12P55289 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH12P55289 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CDH12P55289 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDH12P55289 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
CDH12P55289 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.47■□□□□ 0.55
CDH12P55289 AC026271.2-201ENST00000428091 497 ntBASIC18.47■□□□□ 0.55
CDH12P55289 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDH12P55289 AC013268.1-206ENST00000638368 961 ntBASIC18.47■□□□□ 0.55
CDH12P55289 AC112229.1-201ENST00000639295 961 ntBASIC18.47■□□□□ 0.55
CDH12P55289 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH12P55289 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.47■□□□□ 0.55
CDH12P55289 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH12P55289 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH12P55289 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH12P55289 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH12P55289 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH12P55289 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH12P55289 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
CDH12P55289 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDH12P55289 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH12P55289 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDH12P55289 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH12P55289 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH12P55289 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDH12P55289 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CDH12P55289 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.46■□□□□ 0.55
CDH12P55289 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH12P55289 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
CDH12P55289 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.46■□□□□ 0.55
CDH12P55289 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.46■□□□□ 0.55
CDH12P55289 AC007322.4-201ENST00000509611 723 ntBASIC18.46■□□□□ 0.55
CDH12P55289 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.46■□□□□ 0.55
CDH12P55289 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.46■□□□□ 0.55
CDH12P55289 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH12P55289 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms